BQ623077

Overview
NameBQ623077
Unique NameBQ623077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length444
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3936 contig Csv1_Contig3936:13..453. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
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BLAST of BQ623077 vs. ExPASy Swiss-Prot
Match: TOM6_ARATH (Mitochondrial import receptor subunit TOM6 homolog OS=Arabidopsis thaliana GN=TOM6 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.425e-13
Identity = 32/42 (76.19%), Postives = 38/42 (90.48%), Query Frame = 2 
Query:   59 MFPGMFMKKPDKAAALKQLRSHVAMFGTWVVVIRVTPYLLHY 184
            MFPGMFM+KPDKA ALKQLR+HVA+FG+WVV+IR  PY+L Y
Sbjct:    1 MFPGMFMRKPDKAEALKQLRTHVALFGSWVVIIRAAPYVLSY 42
The following BLAST results are available for this feature:
BLAST of BQ623077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TOM6_ARATH1.425e-1376.19Mitochondrial import receptor subunit TOM6 homolog... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00168 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00168 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623077 ID=BQ623077; Name=BQ623077; organism=Citrus sinensis; type=EST; length=444bp
ATATTGAAGCGTCTGATCAAAAGAGTAACACAAAGCTAGGGTTTAAGCCG
AAGCAAGGATGTTTCCGGGAATGTTCATGAAGAAGCCAGACAAGGCGGCG
GCCTTGAAGCAGCTGCGGAGCCACGTGGCCATGTTCGGGACCTGGGTCGT
TGTGATTCGCGTCACCCCCTACCTTCTTCACTATTTCTCCAGAGAAAAAG
AAGAGCTCAAGCTCGAATTCTAAATCTCTTTTTCTCTCTCTAGCAGCTGT
AAGATGAAGATGAAGAGAAAACGACGTGCTGTTTAGAAGTGTCATAATTG
TTTTTAATGTATGCCCTGGATTTGGCAGGGGTAACATACCTGTAACTTGT
TATTGAGTTTGAAGCTTGGGTGGGTACTTTCGTAAAATGCAATAACTGGT
CTATGATTATTCTTGTTGAATTTACTTTTGGTAGCAGTATCTAC
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