BQ623083

Overview
NameBQ623083
Unique NameBQ623083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4376 contig Csv1_Contig4376:189..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_HEVBR (Translationally-controlled tumor protein homolog OS=Hevea brasiliensis GN=TCTP PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.280e-70
Identity = 130/156 (83.33%), Postives = 133/156 (85.26%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEI NGILWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVTYMKRFIKLLTPKL EE+QE FKKNIEGATKFLLSKLSDLQFFVGESMHDDG LVFAYY+ GATDPTFLY A ALKEVKC
Sbjct:   13 LLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKFLLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168          

HSP 2 Score: 28.1054 bits (61), Expect = 4.280e-70
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_ELAGV (Translationally-controlled tumor protein homolog OS=Elaeis guineensis var. tenera GN=TCTP PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.094e-68
Identity = 122/156 (78.21%), Postives = 133/156 (85.26%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEI NG+LWEVEGKWV+QGAV+VDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E+QE+FKK+IEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYK+GATDPTFLY A  LKE+KC
Sbjct:   13 LLSDSFPYKEIHNGMLWEVEGKWVIQGAVNVDIGANPSAEGGEEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLDAEKQELFKKHIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKDGATDPTFLYFAYGLKEIKC 168          

HSP 2 Score: 28.1054 bits (61), Expect = 5.094e-68
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_ORYSJ (Translationally-controlled tumor protein homolog OS=Oryza sativa subsp. japonica GN=TCTP PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.247e-64
Identity = 117/156 (75.00%), Postives = 128/156 (82.05%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPY+EIENGILWEV+GKWVVQGA+DVDIGANPS               KVVDIVDTFRLQEQP FDKK FVT+MKR+IK L+ KL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GATDPTFLY +  LKEVKC
Sbjct:   13 LLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKYLLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168          

HSP 2 Score: 28.1054 bits (61), Expect = 3.247e-64
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_CUCMA (Translationally-controlled tumor protein homolog OS=Cucurbita maxima GN=TCTP PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.165e-64
Identity = 117/156 (75.00%), Postives = 129/156 (82.69%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKE+ENG++WEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP  DKK F+ Y+K+FIKLLTPKL  E+QE FKKNIEGATKFLL KL D +FFVGESMHDD C+VFAYY+EGATDPTFLY+A ALKEVKC
Sbjct:   13 LLSDSFPYKELENGMIWEVEGKWVVQGAVDVDIGANPSAEGDGEDEGVDDQAVKVVDIVDTFRLQEQPTMDKKQFIAYIKKFIKLLTPKLEGEKQEAFKKNIEGATKFLLPKLKDFRFFVGESMHDDSCIVFAYYREGATDPTFLYLAPALKEVKC 168          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_SOLLC (Translationally-controlled tumor protein homolog OS=Solanum lycopersicum GN=TCTP PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.234e-64
Identity = 115/156 (73.72%), Postives = 127/156 (81.41%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKE+ENG+LWEV+GKWVVQGAVDV+IGANPS               +VVDIVDTFRLQEQPAFDKK FVT+MKR+IK LTPKL  E QE FKKNIE ATKFLL K+ DLQFFVGESMHDDG LVFAYYKEG+ DP FLY+A  LKE+KC
Sbjct:   13 LLSDSFPYKEVENGVLWEVQGKWVVQGAVDVNIGANPSAEGGCEDEGVDDQAVRVVDIVDTFRLQEQPAFDKKQFVTFMKRYIKNLTPKLEGETQEAFKKNIEAATKFLLQKIKDLQFFVGESMHDDGALVFAYYKEGSADPPFLYIAPGLKEIKC 168          

HSP 2 Score: 28.1054 bits (61), Expect = 4.234e-64
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_SOYBN (Translationally-controlled tumor protein homolog OS=Glycine max GN=TCTP PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.026e-62
Identity = 119/156 (76.28%), Postives = 129/156 (82.69%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSF YKEIENG+LWEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKK FVT+MKRFIK LTPKL  E+QE+FKK+IEGATK+LLSK+ D QFFVGESM DD CLVFAYYK+GA DPTFLY A ALKEVKC
Sbjct:   13 LLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKYLLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.115e-61
Identity = 116/156 (74.36%), Postives = 127/156 (81.41%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKE+ NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKK F+ ++KR+IK L  KLSEERQ  FKKN+EGA K L+SKLSDLQFFVGESMHDDG +VFAYYK+GATDPTFLY AD LKEVKC
Sbjct:   13 LLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPSAEGGDEEGVKIRLV-KVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSKLSDLQFFVGESMHDDGSMVFAYYKDGATDPTFLYFADGLKEVKC 167          

HSP 2 Score: 25.7942 bits (55), Expect = 1.115e-61
Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            M+VYQDLL+GDE
Sbjct:    1 MIVYQDLLSGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_SOLTU (Translationally-controlled tumor protein homolog OS=Solanum tuberosum GN=TCTP PE=2 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.481e-61
Identity = 115/156 (73.72%), Postives = 126/156 (80.77%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDSFPYKEI+NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQPAFDKK FVTY+KR+IK LTPKL  E QE FKKNIE ATKFLLSKL D QFFVGE MHDD  LVFAYYK+G+ DPTFLY+A  LKE+KC
Sbjct:   13 LLSDSFPYKEIQNGMLWEVQGKWVVQGAVDVNIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFVTYIKRYIKNLTPKLEGEAQEAFKKNIESATKFLLSKLKDFQFFVGEGMHDDSALVFAYYKDGSADPTFLYLAPGLKEIKC 168          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_PEA (Translationally-controlled tumor protein homolog OS=Pisum sativum GN=TCTP PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 1.895e-61
Identity = 113/156 (72.44%), Postives = 128/156 (82.05%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDS+PYKEIENG+LWEVEGKWVV+GAVDV+IGANPS               KVVDIVD FRLQEQP FDKK F+ ++K++IKLLTPKL  E+QE FKKNIEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GA DPTFLY + ALKE+KC
Sbjct:   13 LLSDSYPYKEIENGMLWEVEGKWVVKGAVDVNIGANPSAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPPFDKKQFLGFVKKYIKLLTPKLEAEKQEHFKKNIEGATKYLLGKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFSFALKEIKC 167          

HSP 2 Score: 28.1054 bits (61), Expect = 1.895e-61
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 7.142e-61
Identity = 112/156 (71.79%), Postives = 127/156 (81.41%), Query Frame = 2
Query:   95 ILSDSFPYKEIENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKPFVTYMKRFIKLLTPKLSEERQEIFKKNIEGATKFLLSKLSDLQFFVGESMHDDGCLVFAYYKEGATDPTFLYMADALKEVKC 562
            +LSDS+PYKEIENG+LWEVEGKWV +G V+VDIGAN S               KVVDIVD FRLQEQPAFDKK F+ ++KR+IKLLTPKL  E+QE+FKK+IEGATK+LL KL DLQFFVGESMHDDG LVFAYYK+GA DPTFLY A ALKE+KC
Sbjct:   13 LLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANASAEGGEDEGVDDTAV-KVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKYLLCKLKDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAYALKEIKC 167          

HSP 2 Score: 28.1054 bits (61), Expect = 7.142e-61
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:   58 MLVYQDLLTGDE 93
            MLVYQDLLTGDE
Sbjct:    1 MLVYQDLLTGDE 12          
The following BLAST results are available for this feature:
BLAST of BQ623083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
TCTP_HEVBR4.280e-7083.33Translationally-controlled tumor protein homolog O... [more]
TCTP_ELAGV5.094e-6878.21Translationally-controlled tumor protein homolog O... [more]
TCTP_ORYSJ3.247e-6475.00Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCMA4.165e-6475.00Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLLC4.234e-6473.72Translationally-controlled tumor protein homolog O... [more]
TCTP_SOYBN1.026e-6276.28Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ1.115e-6174.36Translationally-controlled tumor protein homolog O... [more]
TCTP_SOLTU1.481e-6173.72Translationally-controlled tumor protein homolog O... [more]
TCTP_PEA1.895e-6172.44Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA7.142e-6171.79Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00174 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00174 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623083 ID=BQ623083; Name=BQ623083; organism=Citrus sinensis; type=EST; length=733bp
TCCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGAC
TGCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCATTCTC
TCCGATTCTTTTCCCTACAAGGAAATTGAGAATGGGATTCTGTGGGAAGT
TGAGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAA
ATCCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCC
GTGAAGGTGGTTGACATTGTCGACACATTCAGGCTACAGGAGCAACCCGC
TTTTGACAAGAAGCCGTTTGTAACATACATGAAGAGATTCATCAAGTTGC
TGACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAAGAATATT
GAGGGAGCGACCAAGTTCTTGCTCTCGAAGCTCAGTGACCTTCAATTCTT
TGTTGGGGAGAGCATGCATGATGATGGCTGTCTTGTCTTTGCTTACTACA
AGGAAGGTGCGACCGACCCAACATTTTTGTATATGGCTGATGCATTGAAG
GAGGTGAAGTGCTAAGCTGGGCTTCGAAGAAGAAGTGCCTGCTGTAGTTC
TAATTTTAATTATTGCCCGCGGTTATTTTTATGTATCTTTTGTGCTGGTT
TACTCGGGACTTGTGCTTGCTGTTTTTTAGTTTTTATTTTGACATAAACA
ATATGTTTTTCTGCTCTTAATTATTGGGTTTTA
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