BQ623108

Overview
NameBQ623108
Unique NameBQ623108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 2.968e-77
Identity = 141/158 (89.24%), Postives = 150/158 (94.94%), Query Frame = 3
Query:    3 RIIEKLPAE-SDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            RI+EKL  E SD R+CFSQDRYIFHILRSDGLTFLCMANDTFGRR+PFSYLE+I MRFMKNYG+VAH APAYAMNDEFSRVLHQQMEFFSSNPS DTLNRVRGEVSEIR++MVENIEKI+ERGDRIELLVDKTATMQD +FHFRKQSKRLRRALWMKN
Sbjct:   31 RILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.070e-54
Identity = 92/157 (58.60%), Postives = 129/157 (82.17%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+EK+P   DS V +SQDRY+FH+ R+DGLT LCMA++  GRRIPFS+LEDI  RF++ YGR  H A AYAMNDEFSRVL+QQ+E++S++P+ADT++R++GE++++R +M+ENI+ IL+RG+R+ELLVDKTA MQ   F FRKQ++R    +W +N
Sbjct:   31 QILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRN 187          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.531e-54
Identity = 91/157 (57.96%), Postives = 131/157 (83.44%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+EK+P ++DS V +SQDRY+FH+ R+DGLT LCMA +T GRRIPF++LEDI  RF++ YGR  H A AYAMN+EFSRVL QQ++++S++P+AD +NR++GE++++R +M+ENI+K+L+RG+R+ELLVDKTA MQ   F FRKQ++R R  +W +N
Sbjct:   31 QILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.027e-53
Identity = 94/158 (59.49%), Postives = 130/158 (82.28%), Query Frame = 3
Query:    3 RIIEKLPA-ESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+EKLP  +SDS + +SQDRYIFH+ R+DGLT LCMA++T GR IPF++L+DI  RF+K YGR  H A AY+MNDEFSRVL QQMEF+S++P+AD ++R++GE+S++R +M+ENI+K+L+RG+R+ELLVDKT  MQ   F FRKQ++R R  +W +N
Sbjct:   31 QILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRN 188          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.262e-35
Identity = 69/158 (43.67%), Postives = 112/158 (70.89%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENI-EKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            RI++ +P  +D+++ +  ++YIFH L SD LT+LCMA++ FGRRIPF++L+D++ RF   YG     A AY MN +FSR L   M+ +S+    DT++R   E+ E++ I+V +I  ++L+RG++IE+LV++T T+   +F F+KQSK+L+ A+W KN
Sbjct:   31 RILDLIPP-NDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKN 187          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.134e-29
Identity = 62/157 (39.49%), Postives = 99/157 (63.06%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   FS+L +++ RF   YG  A  A  YAMN EFS VL  Q++  S N S D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:   31 QILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 60/157 (38.22%), Postives = 98/157 (62.42%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F +L +++ RF   YG  A  A  YAMN EFS VL  Q++  S N S D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ +KN
Sbjct:   31 QILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKN 186          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q++  S N   D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:   31 QILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.548e-28
Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q++  S N   D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:   31 QILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28
Identity = 59/157 (37.58%), Postives = 99/157 (63.06%), Query Frame = 3
Query:    3 RIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 473
            +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q+++ S +   D +   + +V E++ IMV NI+ + +RG+++ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:   31 QILAKIPSENN-KLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
The following BLAST results are available for this feature:
BLAST of BQ623108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
VA714_ARATH2.968e-7789.24Vesicle-associated membrane protein 714 OS=Arabido... [more]
VA712_ARATH2.070e-5458.60Vesicle-associated membrane protein 712 OS=Arabido... [more]
VA711_ARATH3.531e-5457.96Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH1.027e-5359.49Vesicle-associated membrane protein 713 OS=Arabido... [more]
VAM7B_DICDI6.262e-3543.67Vesicle-associated membrane protein 7B OS=Dictyost... [more]
VAMP7_MOUSE5.134e-2939.49Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_RAT2.548e-2838.22Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_HUMAN2.548e-2838.85Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_BOVIN2.548e-2838.85Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_CHICK7.414e-2837.58Vesicle-associated membrane protein 7 OS=Gallus ga... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00199 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00199 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623108 ID=BQ623108; Name=BQ623108; organism=Citrus sinensis; type=EST; length=692bp
GACGGATTATTGAGAAACTGCCGGCGGAGTCCGACTCCAGGGTGTGTTTC
TCGCAGGATCGCTACATATTTCACATACTCAGATCCGATGGCCTCACCTT
CCTCTGTATGGCCAACGACACCTTCGGCAGAAGAATTCCATTTTCATATT
TGGAGGATATTCAAATGAGGTTCATGAAAAACTATGGCAGAGTAGCCCAC
TATGCACCTGCTTATGCTATGAATGATGAGTTTTCAAGGGTATTGCATCA
GCAGATGGAATTTTTCTCCAGCAATCCTAGTGCAGATACTCTCAATCGTG
TGAGAGGGGAAGTTAGTGAGATACGCACCATCATGGTGGAGAATATTGAA
AAAATATTGGAGAGAGGTGATAGGATTGAGCTTCTTGTTGACAAAACTGC
AACAATGCAAGACGGCGCATTTCACTTTAGGAAACAGTCTAAGCGCCTTC
GTAGAGCCCTTTGGATGAAAAATGCCAAGCTATTGGCCCTCTTGACAGGC
TTAATTGTTCTGTTGCTGTACATAATAATTGCTGCTGCTTGTGGAGGCAT
CACTTTACCTTCATGCAAATCTTGAGTCGTGGTCGACTGGTGTTAAATTA
CTGCTCGGGTGGGCATTGATGTTGTTTGTTGACAATTATGTGAATTAATC
TTGGAGAGGTTCCCTTGGTTTTGGGGTCAACTATTTAAGGAG
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