BQ623137

Overview
NameBQ623137
Unique NameBQ623137
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length516
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11 contig Csv1_Contig11:1..516. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623137 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 6.986e-57
Identity = 106/160 (66.25%), Postives = 127/160 (79.38%), Query Frame = 3
Query:    3 NVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVHRNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFF 482
            N+FGRNQKLN+SLERGQIDSI RINY DPWIEGDDK+TSR++MVQNSRTPG LVH NQPDNSS TIGRVTA +E+SRP RPKW+GTA L F       ++   + +   +   T SGK HD+ ++AK ES+YTGSG+ GS+MF F+MEQGLPVLP+WL F
Sbjct:  429 NLFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMVQNSRTPGNLVHGNQPDNSSLTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGARDEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEWLCF 588          
BLAST of BQ623137 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSJ (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. japonica GN=OEP80 PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 99/161 (61.49%), Postives = 119/161 (73.91%), Query Frame = 3
Query:    3 NVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFF 482
            NVFGRN+KLN+SLERGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA IE+SRP RPKWSGT  L F        K   + R       T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL F
Sbjct:  361 NVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSF 521          
BLAST of BQ623137 vs. ExPASy Swiss-Prot
Match: OEP80_ORYSI (Outer envelope protein of 80 kDa OS=Oryza sativa subsp. indica GN=OEP80 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 99/161 (61.49%), Postives = 119/161 (73.91%), Query Frame = 3
Query:    3 NVFGRNQKLNISLERGQIDSILRINYIDPWIEGDDKQTSRTMMVQNSRTPGPLVH-RNQPDNSSQTIGRVTASIEFSRPIRPKWSGTA*LFFSVLVLMMKKEILLSRISIAVLFTGSGKTHDDVLIAKFESVYTGSGNHGSSMFVFDMEQGLPVLPKWLFF 482
            NVFGRN+KLN+SLERGQIDSI R+NY DPWI+GD+K+TSRT+MVQNSRTPG L+H  + PD+   TIGRVTA IE+SRP RPKWSGT  L F        K   + R       T SG  +DD L+AK ESVYT SG+  S+MFVF++EQGLP+LP+WL F
Sbjct:  361 NVFGRNKKLNLSLERGQIDSIFRLNYTDPWIDGDNKRTSRTIMVQNSRTPGTLIHGGDHPDHGPITIGRVTAGIEYSRPFRPKWSGTLGLIFQHAGARDDKGNPIIRDFYNSQLTASGNAYDDTLLAKLESVYTDSGDRSSTMFVFNIEQGLPILPEWLSF 521          
The following BLAST results are available for this feature:
BLAST of BQ623137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
OEP80_ARATH6.986e-5766.25Outer envelope protein of 80 kDa OS=Arabidopsis th... [more]
OEP80_ORYSJ6.333e-5061.49Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
OEP80_ORYSI6.333e-5061.49Outer envelope protein of 80 kDa OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00228 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00228 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623137 ID=BQ623137; Name=BQ623137; organism=Citrus sinensis; type=EST; length=516bp
GGAATGTTTTTGGAAGAAACCAAAAACTCAATATTTCCTTAGAGAGGGGC
CAAATTGATTCTATATTGCGCATAAATTACATTGACCCTTGGATTGAAGG
AGATGACAAACAAACATCAAGAACTATGATGGTTCAGAATTCAAGAACCC
CTGGACCGCTTGTTCATAGGAACCAACCTGACAACAGTAGTCAGACCATT
GGACGTGTGACAGCCAGTATAGAATTCAGTCGACCAATCAGGCCAAAATG
GAGTGGGACGGCATGATTATTTTTCAGCGTGCTGGTTCTCATGATGAAAA
AGGAAATCCTATTATCAAGGATTTCTATAGCAGTCCTCTTTACAGGAAGT
GGAAAGACCCATGATGATGTGTTAATTGCTAAATTTGAGAGTGTATATAC
TGGTTCTGGCAATCACGGTTCTTCAATGTTTGTATTCGACATGGAACAAG
GGCTTCCTGTTTTGCCAAAGTGGTTGTTCTTCATAGAGTGAATGCTCATG
CCAGAAAGGGTGTAGA
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