BQ623140

Overview
NameBQ623140
Unique NameBQ623140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length611
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10009 contig Csv1_Contig10009:956..1565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.086e-99
Identity = 154/168 (91.67%), Postives = 160/168 (95.24%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NHVTGLLDP ELI+PPKI VIEGLHPMYD RVRELLDFSIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDA+IDPQKQYADAVIEVLPTQLIPDDNEGKVLRV+LIMKEG+K F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD YFG EVS+
Sbjct:  157 NHVTGLLDPAELIQPPKIFVIEGLHPMYDERVRELLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVKLIMKEGIKFFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFSYGPDTYFGQEVSV 324          

HSP 2 Score: 60.8474 bits (146), Expect = 2.086e-99
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            LEMDG+FDRLDELIYVESHLSNLSTKFYG
Sbjct:  325 LEMDGQFDRLDELIYVESHLSNLSTKFYG 353          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.086e-99
Identity = 154/168 (91.67%), Postives = 162/168 (96.43%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NHVTGLLDPPELI+PPKILVIEGLHPM+D RVR+LLDFSIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDA+IDPQKQYADAVIEVLPT LIPDDNEGKVLRVRLIMKEGVK+FSPVYLFDEGSTI WIPCGRKLTCSYPGIKF+Y PD+YF HEVS+
Sbjct:  149 NHVTGLLDPPELIQPPKILVIEGLHPMFDERVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKQYADAVIEVLPTTLIPDDNEGKVLRVRLIMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFNYEPDSYFDHEVSV 316          

HSP 2 Score: 60.8474 bits (146), Expect = 2.086e-99
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            LEMDG+FDRLDELIYVESHLSNLSTKFYG
Sbjct:  317 LEMDGQFDRLDELIYVESHLSNLSTKFYG 345          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 5.072e-98
Identity = 152/168 (90.48%), Postives = 161/168 (95.83%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NHVTGLLD PELIKPPKILVIEGLHPM+D+RVR+LLDFSIYLDISNEVKFAWKIQRDM ERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIP DNEGKVLRVRLI KEGV++FSPVYLFDEGS+I WIPCGRKLTCSYPGIKF YGPD YFG+EV++
Sbjct:  150 NHVTGLLDAPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPGDNEGKVLRVRLIQKEGVQYFSPVYLFDEGSSITWIPCGRKLTCSYPGIKFFYGPDTYFGNEVTV 317          

HSP 2 Score: 60.8474 bits (146), Expect = 5.072e-98
Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            LEMDG+FDRLDELIYVESHLSNLSTKFYG
Sbjct:  318 LEMDGQFDRLDELIYVESHLSNLSTKFYG 346          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 5.552e-97
Identity = 149/168 (88.69%), Postives = 162/168 (96.43%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NHV+GLLDPPELI+PPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDM ERGHSLESIKASIE+RKPDFDAYIDPQKQ+AD VIEVLPT+LIPDD+EGKVLRVR+I KEGVK F+PVYLFDEGSTI WIPCGRKLTCSYPGIKFSYGPD ++G+EV++
Sbjct:  155 NHVSGLLDPPELIQPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMKERGHSLESIKASIESRKPDFDAYIDPQKQHADVVIEVLPTELIPDDDEGKVLRVRMIQKEGVKFFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTFYGNEVTV 322          

HSP 2 Score: 58.9214 bits (141), Expect = 5.552e-97
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            +EMDG FDRLDELIYVESHLSNLSTKFYG
Sbjct:  323 VEMDGMFDRLDELIYVESHLSNLSTKFYG 351          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.651e-82
Identity = 129/168 (76.79%), Postives = 146/168 (86.90%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NHV+GL+D PE I+ P ILVIEGLHP YD RV ELLDF IYLDIS+++KFAWKIQRDM ERGHSLESIK+SI ARKPDFDAYIDPQK+ AD +I+VLPTQL+PDD +G+ LRVRLIMKEG K F PVYLFDEGSTI WIPCGRKLTCS+PGIK  YGPD ++G EVS+
Sbjct:  135 NHVSGLIDAPEKIESPPILVIEGLHPFYDKRVAELLDFKIYLDISDDIKFAWKIQRDMAERGHSLESIKSSIAARKPDFDAYIDPQKKDADMIIQVLPTQLVPDD-KGQYLRVRLIMKEGSKMFDPVYLFDEGSTISWIPCGRKLTCSFPGIKMFYGPDTWYGQEVSV 301          

HSP 2 Score: 54.299 bits (129), Expect = 5.651e-82
Identity = 24/29 (82.76%), Postives = 27/29 (93.10%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            LEMDG+FD+L+ELIYVESHLSN S KFYG
Sbjct:  302 LEMDGQFDKLEELIYVESHLSNTSAKFYG 330          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 4.334e-76
Identity = 122/168 (72.62%), Postives = 141/168 (83.93%), Query Frame = 3
Query:    3 NHVTGLLDPPELIKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVRLIMKEGVKHFSPVYLFDEGSTIEWIPCGRKLTCSYPGIKFSYGPDAYFGHEVSI 506
            NH TGLLDPPE ++P K++VIEGLHP+YD RVREL+DF +YLDIS EVK  WKIQRDM ERGH+ E I ASI ARKPDF AYI+PQKQYAD VI+VLPT+LI +D E K+LRVRL+ KEGVK F P YLFDEGSTI+W PCGRKLTC+YPGIK  YGPD + G+EVS+
Sbjct:   90 NHETGLLDPPEKVEPNKVVVIEGLHPLYDERVRELVDFGVYLDISEEVKINWKIQRDMAERGHTYEDILASINARKPDFTAYIEPQKQYADVVIQVLPTRLI-EDKESKLLRVRLVQKEGVKFFEPAYLFDEGSTIDWRPCGRKLTCTYPGIKMYYGPDNFMGNEVSL 256          

HSP 2 Score: 45.4394 bits (106), Expect = 4.334e-76
Identity = 17/29 (58.62%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  508 LEMDGKFDRLDELIYVESHLSNLSTKFYG 594
            LE+DG+F+ L+E++YVE+HLS   TK+YG
Sbjct:  257 LEVDGRFENLEEMVYVENHLSKTGTKYYG 285          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRS7 (Uridine kinase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=udk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12
Identity = 33/82 (40.24%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  ++++EG+  + D R+REL+D  +++D  ++++   +IQRDM ERG SLES I+      KP +  +I+P K+YAD VI
Sbjct:  103 EPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STREM (Uridine kinase OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=udk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12
Identity = 33/82 (40.24%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  ++++EG+  + D R+REL+D  +++D  ++++   +IQRDM ERG SLES I+      KP +  +I+P K+YAD VI
Sbjct:  103 EPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_STRE4 (Uridine kinase OS=Streptococcus equi subsp. equi (strain 4047) GN=udk PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12
Identity = 33/82 (40.24%), Postives = 55/82 (67.07%), Query Frame = 3
Query:   42 KPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLES-IKASIEARKPDFDAYIDPQKQYADAVI 284
            +P  ++++EG+  + D R+REL+D  +++D  ++++   +IQRDM ERG SLES I+      KP +  +I+P K+YAD VI
Sbjct:  103 EPQDVIIVEGILVLEDERLRELMDIKLFVDTDDDIRIIRRIQRDMVERGRSLESIIEQYTSVVKPMYHQFIEPSKRYADIVI 184          
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Match: URK_ENT38 (Uridine kinase OS=Enterobacter sp. (strain 638) GN=udk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 32/83 (38.55%), Postives = 58/83 (69.88%), Query Frame = 3
Query:   39 IKPPKILVIEGLHPMYDARVRELLDFSIYLDISNEVKFAWKIQRDMTERGHSLESIKASIEAR-KPDFDAYIDPQKQYADAVI 284
            I+P K++++EG+  + DAR+RE ++FSI++D   ++    +I+RD+ ERG S++S+ A  +   +P F  +I+P KQYAD ++
Sbjct:  109 IEPKKVIILEGILLLTDARLREAMNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIV 191          
The following BLAST results are available for this feature:
BLAST of BQ623140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
KPPR_WHEAT2.086e-9991.67Phosphoribulokinase, chloroplastic OS=Triticum aes... [more]
KPPR_ARATH2.086e-9991.67Phosphoribulokinase, chloroplastic OS=Arabidopsis ... [more]
KPPR_MESCR5.072e-9890.48Phosphoribulokinase, chloroplastic OS=Mesembryanth... [more]
KPPR_SPIOL5.552e-9788.69Phosphoribulokinase, chloroplastic OS=Spinacia ole... [more]
KPPR_CHLRE5.651e-8276.79Phosphoribulokinase, chloroplastic OS=Chlamydomona... [more]
KPPR_SYNY34.334e-7672.62Phosphoribulokinase OS=Synechocystis sp. (strain P... [more]
URK_STRS72.651e-1240.24Uridine kinase OS=Streptococcus equi subsp. zooepi... [more]
URK_STREM2.651e-1240.24Uridine kinase OS=Streptococcus equi subsp. zooepi... [more]
URK_STRE42.651e-1240.24Uridine kinase OS=Streptococcus equi subsp. equi (... [more]
URK_ENT384.522e-1238.55Uridine kinase OS=Enterobacter sp. (strain 638) GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00231 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00231 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623140 ID=BQ623140; Name=BQ623140; organism=Citrus sinensis; type=EST; length=611bp
ACAATCATGTCACCGGTCTCTTGGACCCCCCCGAGCTCATCAAGCCCCCC
AAGATCCTTGTCATTGAAGGCTTGCACCCAATGTATGATGCTCGGGTGAG
AGAGCTCTTGGACTTTAGTATCTATTTGGACATTAGCAATGAGGTTAAAT
TTGCATGGAAAATTCAGAGAGACATGACAGAGCGAGGACACAGTCTTGAG
AGCATCAAGGCTAGTATTGAAGCCCGAAAGCCAGATTTTGATGCCTATAT
TGATCCACAAAAGCAATATGCTGATGCAGTGATTGAAGTGTTACCAACCC
AACTGATTCCGGACGATAATGAAGGAAAGGTTTTGAGAGTTAGGTTGATC
ATGAAAGAAGGAGTGAAGCACTTCAGCCCGGTTTATCTGTTTGATGAAGG
ATCAACAATCGAATGGATACCTTGCGGAAGGAAGCTTACATGTTCTTACC
CCGGCATCAAATTCTCTTATGGCCCTGACGCTTACTTTGGCCATGAGGTC
TCGATTTTTGGAAATGGATGGGAAATTTGACAGGTTAGATGAGCTAATTT
ATGTCGAAAGCCATCTAAGCAACTTATCAACCAAGTTCTATGGGAGAAGT
CACCCAGCAAT
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