BQ623145

Overview
NameBQ623145
Unique NameBQ623145
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623145 vs. ExPASy Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.197e-12
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1
Query:  151 AMVDDRRSGLNPNAPIFIPNAAFGEVEDFSPEWWDLVKTSPLFRDYWLSQHQE 309
            A +D R S LNPNAP+F P   F EVEDFSP+WWDLV TS  FRD+WLS + E
Sbjct:    3 ATIDRRLSTLNPNAPVFDP-VEFREVEDFSPKWWDLVTTSKWFRDFWLSANSE 54          
The following BLAST results are available for this feature:
BLAST of BQ623145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CID2_ARATH2.197e-1264.15Polyadenylate-binding protein-interacting protein ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00236 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00236 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623145 ID=BQ623145; Name=BQ623145; organism=Citrus sinensis; type=EST; length=638bp
CGTGACTGAACTGAACAGAAGAATCAACGACCACGGTGAGTCGAACTTTC
TAGATCGGAGGGCTATGATCATTTTTCTTTTTGTTTACTACATTGCGTAT
GACTCGTTCGTGATTTGCTGTGATCGGTTATAGAGTTTTGAGAAGCGATG
GCGATGGTGGATGATCGAAGGTCAGGATTGAATCCGAATGCGCCGATATT
TATACCGAACGCTGCGTTTGGTGAAGTGGAGGATTTTTCGCCGGAATGGT
GGGACCTTGTGAAGACTTCGCCGCTGTTCCGTGATTACTGGCTGAGTCAG
CATCAAGAAGATGATTTTACCAGCAGTTTCGACGACTACGATTACTCGGA
TTTGGATGAGTTTCCTGATATTGTCGGCGCTGATCTGTTTGTAGAATCTA
AAGAAAAAAATTTATCAGATTTCGAGAAAGGAAGAGTGCTTCTCGATGGT
TTGTAAATTCTGATTACAACAAAAAATCCTCTTTAAAGAAAAGAAAGAAA
TTGTCATTATTTTGTTTTGTGATTGCGATTACAGGCACTGGGAATGGAGT
GGATGCAAAGGCTTTGTTAAAGAACTTGAATGTATCAAAACCTTTGAAGG
AGCGAGGGCCGAAGTCTCCAGTGGGATCTGCTAAGTAT
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