BQ623153

Overview
NameBQ623153
Unique NameBQ623153
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5649 contig Csv1_Contig5649:517..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA4_HUMAN (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.613e-30
Identity = 64/126 (50.79%), Postives = 85/126 (67.46%), Query Frame = 1
Query:    1 PFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNAS 369
            P  KS P+P+ N G VK+VVG  FD IV+D  KDVL+E YAPWCGHC+  EP YN LAK  +G   +VIAKMD T N+    R K +GFPTI F P+G+K  +P+  +  DR +  L KF++++A+
Sbjct:  512 PVIKSQPVPKNNKGPVKVVVGKTFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYNSLAKKYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYFAPSGDKK-NPVKFEGGDRDLEHLSKFIEEHAT 636          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_BOVIN (Protein disulfide-isomerase A3 OS=Bos taurus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.275e-29
Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+PIPE+NDG VK+VV  NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + LR   +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +LK+ A+ P  IQ+    PK +K   E
Sbjct:  364 YLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLRKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKQNPKKYEGGRELSDFISYLKREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA4_BOVIN (Protein disulfide-isomerase A4 OS=Bos taurus GN=PDIA4 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.121e-28
Identity = 61/125 (48.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query:    1 PFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNAS 369
            P  KS P+P+ N G VK+VVG  FD IV+D  KDVL+E YAPWCGHC+  EP Y  L K  +G  ++VIAKMD T N+    R K +GFPTI F P+G+K       D +R +  L KF++++A+
Sbjct:  510 PVIKSQPVPKNNKGPVKVVVGKTFDSIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGHKNLVIAKMDATANDVTSDRYKVEGFPTIYFAPSGDKKKPIKFEDGNRDLEHLSKFIEEHAT 634          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_CHICK (Protein disulfide-isomerase A3 OS=Gallus gallus GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.121e-28
Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+P+PE NDG VK+VV  NFDEIV  E KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PAG K   P   +  R V     +LK+ A+    +Q+   A K++K   E
Sbjct:  362 YLKSEPVPENNDGPVKVVVAENFDEIVNAEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFAPAGKKQ-SPKKYEGGREVSDFISYLKREATSTPVLQEEDKAKKSKKKAKE 503          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_PONAB (Protein disulfide-isomerase A3 OS=Pongo abelii GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.771e-28
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+PIPE+NDG VK+VV  NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  364 YLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_HUMAN (Protein disulfide-isomerase A3 OS=Homo sapiens GN=PDIA3 PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 2.771e-28
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+PIPE+NDG VK+VV  NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  364 YLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_CERAE (Protein disulfide-isomerase A3 OS=Cercopithecus aethiops GN=PDIA3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.771e-28
Identity = 68/143 (47.55%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+PIPE+NDG VK+VV  NFDEIV +E+KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK  +P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  364 YLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPA-NKKLNPKKYEGGRELSDFISYLQREATNPPVIQE--EKPKKKKKAQE 503          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA4_RAT (Protein disulfide-isomerase A4 OS=Rattus norvegicus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27
Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query:    1 PFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNAS 369
            P  KS P+P+ N G V++VVG  FD IV+D  KDVL+E YAPWCGHC+  EP Y  L K  +G   +VIAKMD T N+  + R K +GFPTI F P+G+K  +PI  +  +R +  L KF+ ++A+
Sbjct:  510 PVIKSQPVPKNNKGPVRVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPVYTSLGKKYKGQKDLVIAKMDATANDITNDRYKVEGFPTIYFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHAT 634          

HSP 2 Score: 68.1662 bits (165), Expect = 4.019e-11
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   16 DPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTNEHHRAKSD--GFPTILFFPAG 288
            D +    +  V ++   NFD  V D+   VLLE YAPWCGHC+ F P Y K+A  L+  D  I +AK+D T+     +K D  G+PTI     G
Sbjct:   52 DDLEVKEENGVWVLNDENFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKG 144          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA4_MOUSE (Protein disulfide-isomerase A4 OS=Mus musculus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 1.796e-27
Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query:    1 PFFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE--HHRAKSDGFPTILFFPAGNKSFDPINVD-VDRTVVALYKFLKKNAS 369
            P  KS P+P+ N G VK+VVG  FD IV+D  KDVL+E YAPWCGHC+  EP Y  L K  +G   +VIAKMD T N+  + + K +GFPTI F P+G+K  +PI  +  +R +  L KF+ ++A+
Sbjct:  505 PVIKSQPVPKNNKGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKK-NPIKFEGGNRDLEHLSKFIDEHAT 629          

HSP 2 Score: 68.1662 bits (165), Expect = 4.019e-11
Identity = 38/94 (40.43%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   16 DPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVD-SIVIAKMDGTTNEHHRAKSD--GFPTILFFPAG 288
            D +    +  V ++   NFD  V D+   VLLE YAPWCGHC+ F P Y K+A  L+  D  I +AK+D T+     +K D  G+PTI     G
Sbjct:   47 DDLEVKEENGVWVLNDGNFDNFVADKDT-VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKG 139          
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.001e-27
Identity = 66/143 (46.15%), Postives = 88/143 (61.54%), Query Frame = 1
Query:    4 FFKSDPIPETNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQAFEPTYNKLAKHLRGVDSIVIAKMDGTTNE-HHRAKSDGFPTILFFPAGNKSFDPINVDVDRTVVALYKFLKKNASIPFKIQKPTSAPKTEKPTSE 429
            + KS+PIPE+N+G VK+VV  NFD+IV +E KDVL+E YAPWCGHC+  EP Y +L + L    +IVIAKMD T N+     +  GFPTI F PA NK   P   +  R +     +L++ A+ P  IQ+    PK +K   E
Sbjct:  364 YLKSEPIPESNEGPVKVVVAENFDDIVNEEDKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVKGFPTIYFSPA-NKKLTPKKYEGGRELNDFISYLQREATNPPIIQE--EKPKKKKKAQE 503          
The following BLAST results are available for this feature:
BLAST of BQ623153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
PDIA4_HUMAN8.613e-3050.79Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
PDIA3_BOVIN4.275e-2948.95Protein disulfide-isomerase A3 OS=Bos taurus GN=PD... [more]
PDIA4_BOVIN2.121e-2848.80Protein disulfide-isomerase A4 OS=Bos taurus GN=PD... [more]
PDIA3_CHICK2.121e-2846.85Protein disulfide-isomerase A3 OS=Gallus gallus GN... [more]
PDIA3_PONAB2.771e-2847.55Protein disulfide-isomerase A3 OS=Pongo abelii GN=... [more]
PDIA3_HUMAN2.771e-2847.55Protein disulfide-isomerase A3 OS=Homo sapiens GN=... [more]
PDIA3_CERAE2.771e-2847.55Protein disulfide-isomerase A3 OS=Cercopithecus ae... [more]
PDIA4_RAT1.053e-2748.41Protein disulfide-isomerase A4 OS=Rattus norvegicu... [more]
PDIA4_MOUSE1.796e-2748.41Protein disulfide-isomerase A4 OS=Mus musculus GN=... [more]
PDIA3_MOUSE4.001e-2746.15Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00244 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00244 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623153 ID=BQ623153; Name=BQ623153; organism=Citrus sinensis; type=EST; length=627bp
CCTTTCTTTAAGTCTGATCCAATTCCAGAAACTAATGATGGAGATGTGAA
AATAGTGGTTGGAAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGG
ATGTTCTTCTGGAGATCTATGCCCCTTGGTGTGGGCATTGCCAAGCCTTC
GAGCCAACCTACAACAAACTGGCCAAACATCTACGTGGCGTTGATTCTAT
TGTTATCGCTAAGATGGATGGCACGACAAATGAACATCACAGGGCAAAGT
CTGATGGATTCCCAACAATTCTTTTCTTCCCAGCTGGAAACAAGAGTTTT
GATCCTATCAATGTAGATGTTGACCGTACTGTGGTGGCATTGTACAAGTT
TCTTAAGAAAAATGCTTCAATCCCCTTTAAAATCCAGAAGCCAACATCAG
CACCCAAGACGGAGAAACCAACTTCAGAACCAAAAGCTGAGTCCTCAGAT
ATCAAAGAGAGCCACGAGAGCAGTAGCGACAAAGATGTGAAGGACGAATT
GTAACTTGCCTAAAACAAGGAAGATGATATACAACGGGTGTAATGCTAAA
TTATGTACCTTTTATCAGTCATCAGGTACTAGAAAGAAATATTTATCATA
TAGTTGAATATATAGAGTGGGAGAGTA
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