BQ623162

Overview
NameBQ623162
Unique NameBQ623162
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length627
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3813 contig Csv1_Contig3813:331..958. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_TRIVS (Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria versicolor GN=AS PE=2 SV=3)

HSP 1 Score: 357.066 bits (915), Expect = 4.332e-98
Identity = 166/183 (90.71%), Postives = 175/183 (95.63%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETC KIKALHQYDCLRANKATSAWG+EARVPFLDK+F+N+AM+IDPE KMI P +GR+EKWILRKAFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMM NA +IFPHNTP TKE YYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNLAMSIDPEAKMIKPDQGRIEKWILRKAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMLNAGHIFPHNTPTTKEGYYYRMIFERFFPQNSA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_SANAU (Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia aurantiaca GN=AND1 PE=2 SV=3)

HSP 1 Score: 345.895 bits (886), Expect = 9.987e-95
Identity = 159/180 (88.33%), Postives = 169/180 (93.89%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQ 540
            RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEE H ETCHKIKALHQYDCLRANKATSAWG+EARVPFLDK+F+NVAM+IDPEWKMI P  GR+EKWILR+AFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAH+  HVTDKMM NA +I+PHNTP TKEAYYYRMIFERFFPQ
Sbjct:  329 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEELHLETCHKIKALHQYDCLRANKATSAWGLEARVPFLDKEFVNVAMSIDPEWKMIKPDIGRIEKWILRRAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHSALHVTDKMMLNAAHIYPHNTPTTKEAYYYRMIFERFFPQ 508          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_ASPOF (Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus officinalis PE=2 SV=2)

HSP 1 Score: 343.584 bits (880), Expect = 4.956e-94
Identity = 160/183 (87.43%), Postives = 171/183 (93.44%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDCLRANKATSAWG+EARVPFLDK+F++VAM+IDPE KMI P  GR+EKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTD+MM NA  I+PHNTP TKEAYYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHHETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFMDVAMSIDPESKMIKPDLGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDRMMLNAARIYPHNTPTTKEAYYYRMIFERFFPQNSA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_BRAOL (Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea PE=2 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 1.104e-93
Identity = 157/183 (85.79%), Postives = 174/183 (95.08%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMV+SGEGSDEIFGGYLYFHKAPNK+EFH+ETC KIKALH+YDCLRANKATSA+G+EARVPFLDK+FIN AM++DPE KMI P+EGR+EKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA ++V DKMM  A +IFPHNTPLTKEAYYYRMIFERFFPQNSA
Sbjct:  330 RKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKQEFHQETCRKIKALHKYDCLRANKATSAFGLEARVPFLDKEFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAENVNDKMMSKAAFIFPHNTPLTKEAYYYRMIFERFFPQNSA 512          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_ARATH (Asparagine synthetase [glutamine-hydrolyzing] OS=Arabidopsis thaliana GN=ASN1 PE=2 SV=2)

HSP 1 Score: 338.961 bits (868), Expect = 1.221e-92
Identity = 156/183 (85.25%), Postives = 173/183 (94.54%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMV+SGEG+DEIFGGYLYFHKAPNK+EFH+ETC KIKALH+YDCLRANK+TSA+G+EARVPFLDKDFIN AM++DPE KMI P+EGR+EKW+LR+AFDDEERPYLPKH+LYRQKEQFSDGVGYSWIDGLK HA Q+V DKMM NA +IFPHNTP TKEAYYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKMVLSGEGADEIFGGYLYFHKAPNKKEFHQETCRKIKALHKYDCLRANKSTSAFGLEARVPFLDKDFINTAMSLDPESKMIKPEEGRIEKWVLRRAFDDEERPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAQNVNDKMMSNAGHIFPHNTPNTKEAYYYRMIFERFFPQNSA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS1_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus GN=AS1 PE=2 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 3.927e-91
Identity = 158/183 (86.34%), Postives = 169/183 (92.35%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVK VISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDCLRANK+T AWG+EARVPFLDK+FINVAM IDPE+KMI   EGR+EK+ILR+AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HVTDKM+ NA  IF HNTPLTKEAYYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHTETCRKIKALHQYDCLRANKSTFAWGLEARVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKYILRRAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHAAKHVTDKMILNAGNIFRHNTPLTKEAYYYRMIFERFFPQNSA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS2_PEA (Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum sativum GN=AS2 PE=2 SV=3)

HSP 1 Score: 333.183 bits (853), Expect = 6.699e-91
Identity = 160/183 (87.43%), Postives = 166/183 (90.71%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVK VISGEGSDEIFGGYLYFHKAPNKEEFH ETC KIKALHQYDC RANK+T AWG+EARVPFLDK FINVAM IDPE KMI   EGR+EK+ILRKAFDDEE PYLPKH+LYRQKEQFSDGVGYSWIDGLKAHA +HVTDKMM NA  IFPHNTP TKEAYYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHEETCRKIKALHQYDCQRANKSTYAWGLEARVPFLDKAFINVAMNIDPENKMIKRDEGRIEKYILRKAFDDEENPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVTDKMMLNAGNIFPHNTPNTKEAYYYRMIFERFFPQNSA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS_ORYSJ (Asparagine synthetase [glutamine-hydrolyzing] OS=Oryza sativa subsp. japonica GN=Os06g0265000 PE=2 SV=3)

HSP 1 Score: 331.257 bits (848), Expect = 2.546e-90
Identity = 150/183 (81.97%), Postives = 167/183 (91.26%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMV+SGEGSDEIFGGYLYFHKAPNK+EFH ETC KIKALH YDCLRANK+TSAWGVEARVPFLDK+FINVAM IDPEWKMI    GR+EKW+LR AFDDEE+PYLPKH+LYRQKEQFSDGVGYSWIDGLK HA +HV+D MM NA +++P NTP+TKEAYYYR IFE+FFP+N+A
Sbjct:  329 RKIKSLGVKMVLSGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHLYDCLRANKSTSAWGVEARVPFLDKNFINVAMDIDPEWKMIKRDLGRIEKWVLRNAFDDEEKPYLPKHILYRQKEQFSDGVGYSWIDGLKDHANEHVSDSMMMNASFVYPENTPVTKEAYYYRTIFEKFFPKNAA 511          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS1_PEA (Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum sativum GN=AS1 PE=2 SV=3)

HSP 1 Score: 329.717 bits (844), Expect = 7.406e-90
Identity = 154/183 (84.15%), Postives = 166/183 (90.71%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKS GVK VISGEGSDEIFGGYLYFHKAPN+EEFH+ETC KIKALH+YDCLRANK+T AWG+EARVPFLDKDFI VAM IDPE+KMI   EGR+EKWILRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDG+K HA +HVTD+MM NA +IFP NTP TKEAYYYRMIFERFFPQNSA
Sbjct:  330 RKIKSSGVKWVISGEGSDEIFGGYLYFHKAPNREEFHQETCRKIKALHRYDCLRANKSTYAWGLEARVPFLDKDFIKVAMDIDPEFKMIKHDEGRIEKWILRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMFNASHIFPFNTPNTKEAYYYRMIFERFFPQNSA 512          
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Match: ASNS2_LOTJA (Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus GN=AS2 PE=2 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 1.397e-88
Identity = 153/183 (83.61%), Postives = 164/183 (89.62%), Query Frame = 1
Query:    1 RKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKEEFHRETCHKIKALHQYDCLRANKATSAWGVEARVPFLDKDFINVAMAIDPEWKMINPQEGRLEKWILRKAFDDEERPYLPKHVLYRQKEQFSDGVGYSWIDGLKAHAEQHVTDKMMQNAQYIFPHNTPLTKEAYYYRMIFERFFPQNSA 549
            RKIKSLGVKMV+SGEGSDEIF GYLYFHKAPNKEE H+ETC KIKALH+YDCLRANK+T AWG+EARVPFLDK FI+VAM IDPE KMI   EGR+EKW+LRKAFDDEE PYLPKH+LYRQKEQFSDGVGY WIDGLK HA +HVTDKMM NA  I+P NTP TKEAYYYRMIFERFFPQNSA
Sbjct:  329 RKIKSLGVKMVLSGEGSDEIFAGYLYFHKAPNKEELHQETCSKIKALHKYDCLRANKSTYAWGLEARVPFLDKKFIDVAMGIDPENKMIKRDEGRIEKWVLRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGLKDHAAKHVTDKMMLNASNIYPFNTPNTKEAYYYRMIFERFFPQNSA 511          
The following BLAST results are available for this feature:
BLAST of BQ623162 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ASNS_TRIVS4.332e-9890.71Asparagine synthetase [glutamine-hydrolyzing] OS=T... [more]
ASNS_SANAU9.987e-9588.33Asparagine synthetase [glutamine-hydrolyzing] OS=S... [more]
ASNS_ASPOF4.956e-9487.43Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS_BRAOL1.104e-9385.79Asparagine synthetase [glutamine-hydrolyzing] OS=B... [more]
ASNS_ARATH1.221e-9285.25Asparagine synthetase [glutamine-hydrolyzing] OS=A... [more]
ASNS1_LOTJA3.927e-9186.34Asparagine synthetase [glutamine-hydrolyzing] 1 OS... [more]
ASNS2_PEA6.699e-9187.43Asparagine synthetase, root [glutamine-hydrolyzing... [more]
ASNS_ORYSJ2.546e-9081.97Asparagine synthetase [glutamine-hydrolyzing] OS=O... [more]
ASNS1_PEA7.406e-9084.15Asparagine synthetase, nodule [glutamine-hydrolyzi... [more]
ASNS2_LOTJA1.397e-8883.61Asparagine synthetase [glutamine-hydrolyzing] 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00253 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00253 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623162 ID=BQ623162; Name=BQ623162; organism=Citrus sinensis; type=EST; length=627bp
CGGAAGATTAAATCTCTAGGAGTGAAGATGGTGATATCTGGTGAGGGATC
TGATGAGATTTTTGGTGGCTATTTGTACTTCCACAAGGCACCCAATAAGG
AAGAATTCCACCGCGAAACATGTCACAAGATAAAGGCTCTCCACCAGTAT
GATTGCTTGAGAGCTAACAAAGCAACATCTGCTTGGGGTGTAGAAGCTCG
AGTCCCCTTCCTTGACAAAGATTTTATTAATGTAGCAATGGCCATAGATC
CTGAGTGGAAGATGATTAATCCTCAAGAAGGACGTCTCGAGAAGTGGATC
CTGAGGAAGGCCTTCGATGATGAGGAGCGTCCCTATCTGCCAAAGCATGT
TCTGTACAGACAGAAGGAACAATTCAGTGATGGTGTTGGCTATAGTTGGA
TTGATGGCCTCAAAGCACATGCTGAACAACATGTGACTGATAAGATGATG
CAAAATGCTCAATACATCTTCCCACACAACACACCTTTGACTAAAGAAGC
CTACTACTACAGAATGATTTTCGAGAGGTTCTTTCCACAGAATTCAGCCA
GCTAACTGTCCCAGGAGGTGCGAGTGTACCATGCAGCACGGGTAAAGCTG
TCGAATGGGATGCTGAGTGGGCAAATC
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