BQ623218

Overview
NameBQ623218
Unique NameBQ623218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13 contig Csv1_Contig13:1..569. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623218 vs. ExPASy Swiss-Prot
Match: PFPA_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Ricinus communis GN=PFP-ALPHA PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.020e-80
Identity = 106/112 (94.64%), Postives = 107/112 (95.54%), Query Frame = 2
Query:  227 LVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIPLMGRRASHVALECTLQSHPNMVILGEEVGCFK 562
            LVIIGGVTSNTDAA LAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFI LMGR+ASHVALECTLQSHPNMVILGEEV   K
Sbjct:  184 LVIIGGVTSNTDAAQLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNMVILGEEVAASK 295          

HSP 2 Score: 107.842 bits (268), Expect = 2.020e-80
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 1
Query:    1 YDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDG 225
            ++ALK+HNP ST            AQKTLEVT +ILSTYKNQGGYD+LGRTKDQIRTTEQV+AALT CKNL LDG
Sbjct:  109 HNALKIHNPNSTLLGFLGGSEGLFAQKTLEVTDDILSTYKNQGGYDLLGRTKDQIRTTEQVHAALTTCKNLKLDG 183          
BLAST of BQ623218 vs. ExPASy Swiss-Prot
Match: PFPA_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.296e-76
Identity = 101/112 (90.18%), Postives = 104/112 (92.86%), Query Frame = 2
Query:  227 LVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIPLMGRRASHVALECTLQSHPNMVILGEEVGCFK 562
            LVIIGGVTSNTDAA+LAE FAE KC TKVVGVPVTLNGDLKNQFVE NVGFDTICKVNSQLISNVCTDALSAEKYYYFI LMGR+ASHVAL+CTLQSHPNMVILGEEV   K
Sbjct:  184 LVIIGGVTSNTDAAHLAEKFAETKCLTKVVGVPVTLNGDLKNQFVEANVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALDCTLQSHPNMVILGEEVAASK 295          

HSP 2 Score: 104.76 bits (260), Expect = 1.296e-76
Identity = 50/75 (66.67%), Postives = 58/75 (77.33%), Query Frame = 1
Query:    1 YDALKLHNPKSTXXXXXXXXXXXXAQKTLEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDG 225
            +DALK+HNPK+             AQKTLE+T ++L+TYKNQGGYDMLGRTKDQIRTTEQVNAA+ ACK L LDG
Sbjct:  109 HDALKVHNPKNILLGFLGGSEGLFAQKTLEITDDVLATYKNQGGYDMLGRTKDQIRTTEQVNAAMAACKALKLDG 183          
BLAST of BQ623218 vs. ExPASy Swiss-Prot
Match: PFPB_RICCO (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Ricinus communis GN=PFP-BETA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.658e-35
Identity = 62/112 (55.36%), Postives = 79/112 (70.54%), Query Frame = 2
Query:  227 LVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIPLMGRRASHVALECTLQSHPNMVILGEEVGCFK 562
            LV+IGG  SNT+A  LAE F      T+V+G P T++GDLK + V T+ GFDT CK+ S++I NV  DA S  KYY+F+ LMGR ASH+ LEC LQ+HPN+ I+GEEV   K
Sbjct:  178 LVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKK 289          

HSP 2 Score: 39.2762 bits (90), Expect = 3.658e-35
Identity = 17/47 (36.17%), Postives = 29/47 (61.70%), Query Frame = 1
Query:   85 LEVTKEILSTYKNQGGYDMLGRTKDQIRTTEQVNAALTACKNLNLDG 225
            +++T + +  Y+NQGG+DM+   +D+I T EQ   A      L+L+G
Sbjct:  131 VQLTADYIHPYRNQGGFDMICSGRDKIETPEQFKQAEETAGKLDLNG 177          
BLAST of BQ623218 vs. ExPASy Swiss-Prot
Match: PFPB_SOLTU (Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 7.073e-30
Identity = 67/139 (48.20%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  134 MTCWDAQKIKSEQQSKSMLH*LHAKI*TWMALVIIGGVTSNTDAAYLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIPLMGRRASHVALECTLQSHPNMVILGEEV 550
            M C    KI++ +Q K       AK      LV+IGG  SNT+A  LAE F      T+V+G P T++GDLK++ V T+ GFDT CK+ +++I NV  DA S  KYY+F+ LMGR ASH+ LEC LQ+HPN+ ++GEEV
Sbjct:  149 MICSGRDKIETPEQFKQAEE--TAKKLDLDGLVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYAEMIGNVMIDARSTGKYYHFVRLMGRAASHITLECALQTHPNVTLIGEEV 285          
The following BLAST results are available for this feature:
BLAST of BQ623218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PFPA_RICCO2.020e-8094.64Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPA_SOLTU1.296e-7690.18Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_RICCO3.658e-3555.36Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
PFPB_SOLTU7.073e-3048.20Pyrophosphate--fructose 6-phosphate 1-phosphotrans... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00309 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00309 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623218 ID=BQ623218; Name=BQ623218; organism=Citrus sinensis; type=EST; length=570bp
TACGATGCGCTCAAGCTACACAACCCTAAGAGTACTTTGCTTGGATTTTT
GGGTGGTTCTGAAGGTTTATTTGCACAGAAAACTCTTGAGGTCACAAAAG
AAATTCTTTCAACCTACAAAAATCAAGGTGGTTATGACATGCTGGGACGC
ACAAAAGATCAAATCAGAACAACAGAGCAAGTCAATGCTGCACTAACTGC
ATGCAAAAATTTGAACTTGGATGGCCCTTGTCATTATTGGAGGGGTCACA
TCAAACACAGATGCTGCATACCTTGCTGAAACATTTGCTGAAGCAAAATG
CCCAACAAAGGTGGTTGGTGTTCCTGTTACTTTGAATGGAGATCTCAAGA
ATCAATTTGTGGAAACCAATGTTGGTTTTGATACAATATGCAAGGTCAAT
TCACAACTGATCAGTAATGTGTGCACTGATGCTCTCTCTGCAGAGAAGTA
TTATTATTTTATTCCTCTGATGGGTAGGAGGGCATCACATGTTGCTTTGG
AATGCACCCTTCAGTCTCATCCGAATATGGTAATTCTAGGTGAGGAAGTG
GGCTGCTTCAAAGCTTACTC
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