BQ623221

Overview
NameBQ623221
Unique NameBQ623221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 6.090e-81
Identity = 141/175 (80.57%), Postives = 152/175 (86.86%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQISRGQWERRLQTDIHMAKQALCAALSPDKAS 551
            MGRPPCCDKIG+KKGPWTPEEDIILVSYIQEHGPGNWRA+P+NTGLLRCSKSCRLRWTNYLRPGIKRG+FT+ EEKMIIHLQALLGNRWAAIASYLP RTDNDIKNYWNTHLKKK+ KLQ    G  +D +   D     S + +S+GQWERRLQTDIHMAKQALC ALS DK S
Sbjct:    1 MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKLQSPENGKCQDGNSSVD-----SDKSVSKGQWERRLQTDIHMAKQALCDALSLDKTS 170          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 3.051e-48
Identity = 83/116 (71.55%), Postives = 98/116 (84.48%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            MGR PCC+K+G+KKGPWTPEED +LV++IQ HG GNWRA+P   GLLRC KSCRLRW NYLRP IKRGNF+ +EE  IIHL  LLGNRW+AIA+ LP RTDN+IKN W+THLKK++
Sbjct:    1 MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRL 116          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.373e-47
Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 3
Query:   30 GRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV--RKLQLAAAGCSEDNSQYRDELASASS 452
            GR PCC K+G+ +G WTP+ED+ L++YIQ+HG  NWRA+P   GLLRC KSCRLRW NYLRP +KRGNFTD+EE+ II L  LLGN+W+ IA+ LP RTDN+IKN WNTHLKKKV  R+ + A AG  +  +     L+SA+S
Sbjct:    4 GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKKKAGAGSGDAGTPATAPLSSATS 146          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 7.776e-44
Identity = 74/116 (63.79%), Postives = 94/116 (81.03%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            MGR PCC+K+G+K+G WT EED +L +YI EHG G+WR++P N GLLRC KSCRLRW NYLR  +KRGN + +EE +II L A LGNRW+ IAS+LP RTDN+IKNYWN+HL +++
Sbjct:    1 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 116          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.859e-43
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKLQLAAAGCSEDNSQYRDELASASSQQI 461
            MGR PCC+K    KG WT EED  LV YI+ HG G WR++P + GLLRC KSCRLRW NYLRP +KRGNFTD E+++II L +LLGN+W+ IA  LP RTDN+IKNYWNTH+K+K     L + G      +  +E  + SSQ +
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRK-----LLSHGIDPQTHRQINESKTVSSQVV 140          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: ODO1_PETHY (Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.583e-43
Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKL 383
            MGR PCCDK+G+KKGPWT EED  L+S+I  +G   WRAVP   GL RC KSCRLRWTNYLRP +KRG  +D EEK++I L + LGNRW+ IA+ LP RTDN+IKN+WNTH+KKK+ K+
Sbjct:    1 MGRQPCCDKLGVKKGPWTAEEDKKLISFILTNGQCCWRAVPKLAGLKRCGKSCRLRWTNYLRPDLKRGLLSDAEEKLVIDLHSRLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKM 119          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42
Identity = 73/116 (62.93%), Postives = 93/116 (80.17%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            MGR PCC+K  + KG WT EED +LV YI++HG G WR++P   GL RC KSCRLRW NYLRP +KRGNFT++E+++II L +LLGN+W+ IA  LP RTDN+IKNYWNTH+K+K+
Sbjct:    1 MGRSPCCEKAHMNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42
Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 3
Query:   27 MGRPPCCDKI-GIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVRKL 383
            MGR PCCD+  G+KKGPW PEED  L +YI E+G GNWR++P   GL RC KSCRLRW NYLRP I+RG F+D EE  I+ L ALLGN+W+ IA +LP RTDN+IKNYWNTH++KK+ ++
Sbjct:    1 MGRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQM 120          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.466e-42
Identity = 72/116 (62.07%), Postives = 93/116 (80.17%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKV 374
            MGR PCC+K+GIK+G WT EED IL +YIQ +G G+WR++P N GL RC KSCRLRW NYLR  +KRGN T +EE++++ L + LGNRW+ IA +LP RTDN+IKNYWN+HL +K+
Sbjct:    1 MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKL 116          
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.501e-42
Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 3
Query:   27 MGRPPCCDKIGIKKGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKVR 377
            MGR PCC+K+G+++GPWT EED  LVS+I  +G   WRA+P   GLLRC KSCRLRWTNYLRP +KRG F++ EE +I+ L A LGNRW+ IA+ LP RTDN+IKNYWNT LKK++R
Sbjct:    1 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLR 117          
The following BLAST results are available for this feature:
BLAST of BQ623221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
MYB06_ANTMA6.090e-8180.57Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
MYB4_ORYSJ3.051e-4871.55Myb-related protein Myb4 OS=Oryza sativa subsp. ja... [more]
MYB1_MAIZE3.373e-4760.14Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYBP_MAIZE7.776e-4463.79Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
MYB6_ARATH3.859e-4355.86Transcription repressor MYB6 OS=Arabidopsis thalia... [more]
ODO1_PETHY6.583e-4364.71Protein ODORANT1 OS=Petunia hybrida GN=ODO1 PE=2 S... [more]
MYB3_ARATH1.466e-4262.93Transcription factor MYB3 OS=Arabidopsis thaliana ... [more]
MYB39_ARATH1.466e-4263.33Transcription factor MYB39 OS=Arabidopsis thaliana... [more]
MYB12_ARATH1.466e-4262.07Transcription factor MYB12 OS=Arabidopsis thaliana... [more]
MYB2_PHYPA2.501e-4264.10Myb-related protein Pp2 OS=Physcomitrella patens G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00312 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00312 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623221 ID=BQ623221; Name=BQ623221; organism=Citrus sinensis; type=EST; length=620bp
AGAAGAAGAACTTTAACAAATTTGATATGGGGAGGCCACCTTGTTGTGAC
AAAATTGGTATCAAGAAAGGGCCATGGACTCCAGAAGAAGATATCATTTT
AGTTTCTTATATTCAAGAGCATGGCCCTGGAAATTGGAGGGCTGTTCCCA
CTAATACAGGATTGCTTAGATGCAGCAAAAGTTGCAGGCTTAGATGGACT
AATTACCTAAGGCCAGGGATCAAGCGTGGGAATTTCACTGATCAAGAAGA
GAAGATGATAATTCATCTGCAAGCACTTTTGGGCAACAGATGGGCGGCTA
TTGCTTCTTATCTCCCTCAGAGAACTGACAATGACATCAAGAACTATTGG
AATACTCACTTGAAGAAGAAGGTGAGGAAGCTGCAACTAGCTGCTGCTGG
CTGCTCTGAAGATAATAGCCAATATAGAGATGAGCTAGCTTCAGCTTCTT
CACAGCAAATCTCAAGGGGTCAGTGGGAGAGAAGGCTGCAGACTGATATT
CACATGGCTAAGCAAGCTCTATGTGCGGCCTTGTCACCAGATAAAGCGAG
TATTTTGTCTGAATTGAAAGCCTGCTAATGGGTTCATTTCCTACACAAAA
CCAGCAGTTCAAGCACCAGC
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