BQ623261

Overview
NameBQ623261
Unique NameBQ623261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.337e-58
Identity = 110/154 (71.43%), Postives = 129/154 (83.77%), Query Frame = 2
Query:  167 VGSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDE-TMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKG 625
            V  +NGSLL PF D P +LL+DLW++R  DPFRVLE IPF +++DE +MA+SPARVDWKETPEGH IMLDVPG+KR+E+K+EVEENRVLRVSG         GD WHRVERS+GKFWRQF+LP NVDLDSV+AKLENGVLTL+L KLSP +IKG
Sbjct:   15 VAKANGSLL-PFMDPPITLLADLWSDRFPDPFRVLEHIPFGVDKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIKG 167          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.302e-56
Identity = 103/153 (67.32%), Postives = 125/153 (81.70%), Query Frame = 2
Query:  167 VGSSNGSLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKG 625
            + +S GSL +     P SLLSDLW +R  DPF++LE+IP  LERD ++ALSPARVDWKET EGH IMLD+PG+K+DE+KIEVEEN VLRVSG         GDQWHRVERS+GKFWRQFKLPDNVD++SV+AKLENGVLT++L KLSP+++KG
Sbjct:   19 IKTSEGSLSSALETTPGSLLSDLWLDRFPDPFKILERIPLGLERDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKG 171          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.999e-55
Identity = 103/146 (70.55%), Postives = 121/146 (82.88%), Query Frame = 2
Query:  191 LTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDE-TMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKG 625
            L PF D P +LLSDLW++R  DPFRVLEQIP+ +E+ E ++ LS ARVDWKETPEGH IM+DVPG+K+D++KIEVEENRVLRVSG         GD WHRVERS+GKFWRQFKLP NVDLDSV+AK+ENGVLTL+L KLS D+IKG
Sbjct:   30 LLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSITLSHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKG 175          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.453e-39
Identity = 72/129 (55.81%), Postives = 98/129 (75.97%), Query Frame = 2
Query:  251 ADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSG----XXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKLSPDQIKG 625
            ADPFR+LE +PF  +RD+   LS ARVDW+ET + H +++DVPG+++++L++EVE+NRVLR+SG             GD WHR ERS+G+FWRQ +LPDN DLDS+ A L+NGVLT+  +KL+PDQIKG
Sbjct:   52 ADPFRILEHVPFGFDRDDVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTVRFRKLAPDQIKG 180          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 2
Query:  200 FADRPRSLLSDLWTERLADPFRVLEQIPFELERD-ETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            F DR  + + D ++  + DPF+   ++ F +    ET A +  R+DWKETPE H    D+PG+K++E+K+EVEE+RVL++SG          D WHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    8 FGDRRSTSVFDPFSIDVFDPFK---ELGFTVSNSGETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK 139          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.608e-28
Identity = 62/134 (46.27%), Postives = 90/134 (67.16%), Query Frame = 2
Query:  200 FADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            F DR  S + D ++  + DPFR L   P      E+ A +  R+DWKETPE H   +D+PG+K++E+K+EVEE+RVL++SG          D+WHR+ERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    8 FGDRRSSSMFDPFSIDVFDPFRELG-FP-STNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK 139          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.042e-27
Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 2
Query:  200 FADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            F DR  S + D ++  + DPFR L   P      ET A +  R+DWKETPE H    D+PG+K +E+K+EVEE+RVL++SG          D+W RVERS GKF R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:    8 FGDRRSSSMFDPFSIDVFDPFRELG-FP-GTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPK 139          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 64/139 (46.04%), Postives = 91/139 (65.47%), Query Frame = 2
Query:  185 SLLTPFADRPRSLLSDLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            S++  F    RS + D ++    DPF+ +  I  E  R ET A+  AR+DWKETPE H +  D+PG+K++E+K+EVE+ RVL++SG          D WHRVERS GKF R+F+LP+N  +D V+A +ENGVLT+ + K
Sbjct:    2 SIIPSFFTSKRSNIFDPFSLDTWDPFQGI--ISTEPAR-ETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMMENGVLTVVVPK 137          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 60/130 (46.15%), Postives = 82/130 (63.08%), Query Frame = 2
Query:  224 LSDLWTERLADPF----RVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKK 601
            L ++W     DPF      L  +P      ET A + AR+DWKETPE H    D+PGVK++E+K+EVE+  VLR+SG          D WHRVERS G+F R+F+LP+N  +D V+A +ENGVLT+++ K
Sbjct:   23 LDEIW-----DPFFGLPSTLSTVPRSETAAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKNDTWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPK 147          
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.321e-27
Identity = 61/125 (48.80%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  230 DLWTERLADPFRVLEQIPFELERDETMALSPARVDWKETPEGHFIMLDVPGVKRDELKIEVEENRVLRVSGXXXXXXXXXGDQWHRVERSHGKFWRQFKLPDNVDLDSVQAKLENGVLTLSLKKL 604
            D+W     DPF+ L Q P  L   ET A++ ARVDWKET E H    D+PG+K++E+K+E+E++ VL++SG          D WHRVERS G+F R+FKLP+NV +D V+A +ENGVLT+++ K+
Sbjct:   24 DVW-----DPFKEL-QFPSSLS-GETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENGVLTVTVPKV 141          
The following BLAST results are available for this feature:
BLAST of BQ623261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
HSP41_SOYBN4.337e-5871.4322.0 kDa class IV heat shock protein OS=Glycine ma... [more]
HSP22_ARATH5.302e-5667.3222.0 kDa heat shock protein OS=Arabidopsis thalian... [more]
HSP41_PEA9.999e-5570.5522.7 kDa class IV heat shock protein OS=Pisum sati... [more]
HS232_ORYSJ3.453e-3955.8123.2 kDa heat shock protein OS=Oryza sativa subsp.... [more]
HSP12_SOLPE1.608e-2845.1917.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_SOLLC1.608e-2846.2717.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP11_SOLPE1.042e-2747.0117.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_HELAN2.321e-2746.0417.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP11_CHERU2.321e-2746.1518.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS178_ARATH2.321e-2748.8017.8 kDa class I heat shock protein OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00352 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623261 ID=BQ623261; Name=BQ623261; organism=Citrus sinensis; type=EST; length=626bp
TGTCAATATCTATCTAGCTTCAAGCCTCTCTACCAACAAGCACATTACAT
ATAATACATCAAGCACAAAGCCAAAAAGGAAGGAAGAAATGAGGCAGCAA
CAACAAACACGGCCCTTTAATGTTAATTTGCTGCCAATGCTGCTCTTGGC
AATATTGGCATGTCTTGTGGGCTCATCAAATGGCTCTCTGCTGACGCCCT
TCGCTGATCGTCCGAGGAGTCTGTTATCCGATCTCTGGACAGAACGTTTG
GCAGACCCCTTCCGGGTGCTAGAGCAAATCCCATTTGAGCTCGAGAGGGA
CGAGACCATGGCGCTATCTCCCGCTAGAGTGGACTGGAAAGAGACACCGG
AGGGTCACTTCATAATGCTGGATGTACCGGGGGTGAAGAGGGACGAGCTG
AAGATTGAAGTTGAGGAGAATCGCGTGCTGCGAGTGAGCGGAGAGAGGAA
ACGGGAGGAGGAGAAGAAGGGCGATCAGTGGCACAGAGTGGAGAGATCCC
ATGGCAAGTTTTGGAGGCAGTTCAAGCTGCCGGACAATGTGGATTTAGAT
TCTGTACAGGCTAAGCTTGAAAATGGGGTGCTCACTTTGTCCTTGAAAAA
GCTGTCACCTGACCAGATCAAAGGTC
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