BQ623264

Overview
NameBQ623264
Unique NameBQ623264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Match: XYLB_RAT (Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   12 EILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEK 521
            EI P + +G HR+  +N           +EV  F    E+RALVEGQF++ R HAE  G    P+ +I+ATGGAS N+ IL  LA ++G  +Y +    SA +G+A RA HG      G+ V  S + K   +    S       G  Q+   YA ++ +  E+E R++ K
Sbjct:  381 EITPEI-IGCHRFNADN-----------MEVSAFPGDVEIRALVEGQFMAKRIHAEGLGYRIMPKTKILATGGASHNKDILQVLADVFGAPVYVIDTTSSACVGSAYRAFHGL---AGGTGVAFSEVVKSAPQP---SLAATPNPGASQV---YAALLPRYAELEQRILSK 530          
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Match: XYLB_MOUSE (Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 59/174 (33.91%), Postives = 87/174 (50.00%), Query Frame = 3
Query:   12 EILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYKDKLEKTSLSCKLAVTAGDQQLVSKYAVMMKKRLEIENRLVEKLGR 530
            EI P + +G HR+  EN           +EV  F    E+RAL+EGQF++ R HAE  G    P+ +I+ATGGAS N+ IL  LA ++G  +Y +    SA +G+A RA HG      G+ V  S + K   +    S       G  Q+   YA ++ +   +E R++    R
Sbjct:  396 EITPEI-IGRHRFNAEN-----------MEVSAFPGDVEIRALIEGQFMAKRIHAEGLGYRVMPKTKILATGGASHNKDILQVLADVFGAPVYVIDTTSSACVGSAYRAFHGL---AGGTGVAFSEVVKSAPQP---SLAATPNPGASQV---YAALLPRYSALEQRILSTAQR 548          
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Match: XYLB_BOVIN (Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 3
Query:   12 EILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHG 344
            EI P + +G HR+  EN E           V  F    E+RAL+EGQF++ + HAE  G    P+ +I+ATGGAS N+ IL  LA ++G  +Y +   +SA +G+A RA HG
Sbjct:  381 EITPEI-IGRHRFTAENHE-----------VSAFPQDVEIRALIEGQFMAKKIHAEALGYRVMPKTKILATGGASHNRDILQVLADVFGAPVYVIDTANSACVGSAYRAFHG 480          
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Match: XYLB_PONAB (Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 51/129 (39.53%), Postives = 71/129 (55.04%), Query Frame = 3
Query:   12 EILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYK 395
            EI P + +G HR+  EN +           V  F    EVRAL+EGQF++ R HAE  G     + +I+ATGGAS N+ IL  LA ++G  +Y +   +SA +G+A RA HG      G+ VP S + K
Sbjct:  381 EITPEI-IGRHRFNTENHK-----------VAAFPGDVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNRDILQVLADVFGAPVYVIDTANSACVGSAYRAFHGL---AGGTDVPFSEVVK 494          
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Match: XYLB_HUMAN (Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 3
Query:   12 EILPPLPVGFHRYILENFEGETLDGVNEVEVKEFDPPSEVRALVEGQFLSMRGHAERFGLPSPPR-RIIATGGASANQTILSCLASIYGCDIYTVQRPDSASLGAALRAAHGYLCSKKGSFVPISNMYK 395
            EI P + +G HR+  EN +           V  F    EVRAL+EGQF++ R HAE  G     + +I+ATGGAS N+ IL  LA ++   +Y +   +SA +G+A RA HG      G+ VP S + K
Sbjct:  381 EITPEI-IGRHRFNTENHK-----------VAAFPGDVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGL---AGGTDVPFSEVVK 494          
The following BLAST results are available for this feature:
BLAST of BQ623264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
XYLB_RAT3.980e-1635.09Xylulose kinase OS=Rattus norvegicus GN=Xylb PE=2 ... [more]
XYLB_MOUSE5.747e-1533.91Xylulose kinase OS=Mus musculus GN=Xylb PE=2 SV=1[more]
XYLB_BOVIN9.802e-1541.07Xylulose kinase OS=Bos taurus GN=XYLB PE=2 SV=1[more]
XYLB_PONAB6.354e-1439.53Xylulose kinase OS=Pongo abelii GN=XYLB PE=2 SV=1[more]
XYLB_HUMAN4.118e-1338.76Xylulose kinase OS=Homo sapiens GN=XYLB PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00355 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00355 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623264 ID=BQ623264; Name=BQ623264; organism=Citrus sinensis; type=EST; length=708bp
GCAAAGAGCATGAAATTCTTCCTCCCCTCCCAGTTGGCTTTCATCGCTAT
ATTCTCGAGAATTTCGAGGGAGAAACTCTTGATGGTGTAAATGAAGTTGA
AGTGAAGGAATTTGATCCTCCTTCTGAGGTCCGGGCATTGGTTGAGGGCC
AATTTCTCTCTATGCGAGGTCATGCTGAAAGATTTGGTTTGCCTTCTCCA
CCCAGAAGAATCATAGCTACTGGTGGTGCATCAGCAAATCAGACTATTCT
GAGCTGTTTGGCATCTATATACGGCTGTGATATCTATACAGTCCAGAGAC
CTGATTCGGCTTCCTTGGGAGCTGCATTGAGAGCAGCCCATGGTTACTTG
TGCAGCAAAAAGGGAAGCTTTGTGCCAATCTCAAACATGTACAAGGACAA
ATTAGAAAAGACATCTCTGAGTTGCAAGCTTGCTGTGACTGCTGGAGACC
AACAATTGGTGTCTAAATATGCTGTGATGATGAAGAAGAGATTGGAAATA
GAGAATCGCCTTGTCGAGAAGCTGGGCCGATGTTAAAGTTAACAATTGAG
GGAATTTATGTCCTGGTTTTCAATGCCTTGACAAATTTACAGTGATGCCT
TGCACAGCCCGTATACAGAACATTTCTTTGGGTGGAAATATCTGGGAAAT
AACAGACACTTTTACAGATCTGAATATGAAGGCAATAAGATCATCATATT
CAATAAGA
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