BQ623267

Overview
NameBQ623267
Unique NameBQ623267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length646
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:94..739. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSM (Bifunctional protein folD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.108e-59
Identity = 122/215 (56.74%), Postives = 147/215 (68.37%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R E+  EV  L   +   PGLAVV+VG    SQ YV  K++AC   GI SF  +L    S+AEL++ + +LN    VHGILVQLPLPKHI+E+KVL  IS  KD DGFHP N+G+L     DP F PCTP G +E+LK SGV  KGK AVV+GRSNIVG PV+L+LL A ATVTI HS TPD    V+ ADIV+AA G+A M+ GSWIK GA V
Sbjct:   14 VREELRMEVERLKLNHQLTPGLAVVLVGADPASQVYVRNKKRACETAGIASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADGFHPYNVGRLVTG--DPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLLAAHATVTICHSRTPDLAETVKRADIVVAAVGRANMVPGSWIKKGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_GEOUR (Bifunctional protein folD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.599e-58
Identity = 122/215 (56.74%), Postives = 150/215 (69.77%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR EI  EV  L+ K G  PGLAVV+VG    S+ YVSMK KAC +VGI S +  LP   SEA+L+  +H+LN+ P +HGIL+QLPLPK I+ EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MIKG+WIK GA V
Sbjct:   14 IRGEITAEVAKLASK-GVTPGLAVVLVGEDPASKVYVSMKEKACKDVGIFSDEYKLPVDTSEADLLLLIHKLNSDPKIHGILIQLPLPKQIDTEKVLEAISPEKDADGFHPYNVGRLVI--GKPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMIKGAWIKEGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISIN (Bifunctional protein folD OS=Listeria innocua GN=folD PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.089e-58
Identity = 120/215 (55.81%), Postives = 154/215 (71.63%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            + SE+AE V     K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   18 VTSEVAELV-----KQGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPETVTEEKLLKVVEELNEDNTIHGILVQLPLPKHISEEKVIDAISFDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKEYIKPGAIV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_GEOTN (Bifunctional protein folD OS=Geobacillus thermodenitrificans (strain NG80-2) GN=folD PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.563e-58
Identity = 120/215 (55.81%), Postives = 148/215 (68.84%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            IR+E+A+EV  L    G  PGLAV++VG    S SYV  K+KACAEVGI+S     P  +SE EL++K+ ELNA P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +    P FLPCTP G L ++K +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS TPD  +I R+ADI+I A G+A +I    +KPGA V
Sbjct:   15 IRAELADEVAKLKAN-GIEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSLLYTFPATISEEELLAKIQELNADPTVHGILVQLPLPAHIREWSVIETIAPEKDVDGFHPINVGKMMI--GQPAFLPCTPHGVLVMVKSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYAHSKTPDLAAITRQADILIVAVGKARLIGPEHVKPGAVV 226          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISMO (Bifunctional protein folD OS=Listeria monocytogenes GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.654e-58
Identity = 119/215 (55.35%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   14 IQEKVTREVAELV-KEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISMC (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=folD PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.654e-58
Identity = 119/215 (55.35%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   14 IQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISMH (Bifunctional protein folD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.078e-58
Identity = 119/215 (55.35%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   14 IQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISMF (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain F2365) GN=folD PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.037e-57
Identity = 119/215 (55.35%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   14 IQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLIENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD_LISW6 (Bifunctional protein folD OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=folD PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.940e-57
Identity = 118/215 (54.88%), Postives = 153/215 (71.16%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            I+  +  EV  L+ K  K PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE VSE +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T +   + +EADI++ A G A  +K  +IKPGA V
Sbjct:   14 IQERVTTEVAELA-KIDKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPETVSEEKLLEVVEELNTDDTIHGILVQLPLPKHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKNLPEVAKEADILVVATGLAKFVKKEYIKPGAIV 225          
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOMG (Bifunctional protein folD 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=folD2 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.940e-57
Identity = 121/215 (56.28%), Postives = 150/215 (69.77%), Query Frame = 1
Query:    1 IRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAV 645
            +R+EIA EV++L EK G +PGLA V+VG    S+ YV MK  AC E+G+ S    LP   +EAEL++ V  LN+ P +HGILVQLPLPK IN + +L  IS  KDVDGFHP N+G+L M G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+  ATVTI HS T D  S V+EAD+VIAA G   MIKG WIK GA V
Sbjct:   14 LRAEIATEVKILKEK-GIIPGLATVLVGEDPASEVYVRMKGNACQELGMHSVKHTLPATTTEAELLALVARLNSDPTIHGILVQLPLPKQINSDTILEAISPVKDVDGFHPYNVGRL-MVGK-PTFQPCTPYGVMVMLREAGVDLAGKEVVVVGRSNIVGKPVALMCLQQHATVTICHSKTRDLPSKVKEADVVIAAVGVPEMIKGEWIKEGAVV 225          
The following BLAST results are available for this feature:
BLAST of BQ623267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MAGSM1.108e-5956.74Bifunctional protein folD OS=Magnetococcus sp. (st... [more]
FOLD_GEOUR1.599e-5856.74Bifunctional protein folD OS=Geobacter uraniireduc... [more]
FOLD_LISIN2.089e-5855.81Bifunctional protein folD OS=Listeria innocua GN=f... [more]
FOLD_GEOTN3.563e-5855.81Bifunctional protein folD OS=Geobacillus thermoden... [more]
FOLD_LISMO4.654e-5855.35Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMC4.654e-5855.35Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMH6.078e-5855.35Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMF1.037e-5755.35Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISW63.940e-5754.88Bifunctional protein folD OS=Listeria welshimeri s... [more]
FOLD2_GEOMG3.940e-5756.28Bifunctional protein folD 2 OS=Geobacter metallire... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00358 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00358 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623267 ID=BQ623267; Name=BQ623267; organism=Citrus sinensis; type=EST; length=646bp
ATCCGATCTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGG
CAAGGTGCCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTC
AAAGCTATGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAG
TCTTTTGACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAG
CAAGGTTCACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTC
AACTTCCATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATA
AGCCTTGAGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCT
CGCAATGAAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGAT
GCCTTGAACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCT
GTTGTGGTGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCT
GCTGAAAGCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATC
CTGAAAGTATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAA
GCAATGATGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTA
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