BQ623391

Overview
NameBQ623391
Unique NameBQ623391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length374
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623391_ssr355 microsatellite BQ623391_ssr355:355..372. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1885 contig Csv1_Contig1885:238..611. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1B_MOUSE (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Mus musculus GN=Ard1b PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.297e-35
Identity = 72/109 (66.06%), Postives = 91/109 (83.49%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED +G+IVGYVLAKMEE+ ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + FGA+YVSLHVRKSNRAA +LY+ TL +++ +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFGAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1A_MOUSE (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Mus musculus GN=Ard1a PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.297e-35
Identity = 73/109 (66.97%), Postives = 90/109 (82.57%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED NG+IVGYVLAKMEE+ ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + F A+YVSLHVRKSNRAA +LY+ TL ++I +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1A_HUMAN (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Homo sapiens GN=ARD1A PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.297e-35
Identity = 73/109 (66.97%), Postives = 90/109 (82.57%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED NG+IVGYVLAKMEE+ ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + F A+YVSLHVRKSNRAA +LY+ TL ++I +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1A_BOVIN (N-terminal acetyltransferase complex ARD1 subunit homolog A OS=Bos taurus GN=ARD1A PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 4.297e-35
Identity = 73/109 (66.97%), Postives = 90/109 (82.57%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED NG+IVGYVLAKMEE+ ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + F A+YVSLHVRKSNRAA +LY+ TL ++I +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDENGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRAALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1B_RAT (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Rattus norvegicus GN=Ard1b PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.133e-34
Identity = 71/109 (65.14%), Postives = 90/109 (82.57%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED +G+IVGYVLAKMEE+ ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + F A+YVSLHVRKSNRAA +LY+ TL +++ +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDEDGKIVGYVLAKMEEDPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFSAKYVSLHVRKSNRAALHLYSNTLNFQVSEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1B_HUMAN (N-terminal acetyltransferase complex ARD1 subunit homolog B OS=Homo sapiens GN=ARD1B PE=1 SV=3)

HSP 1 Score: 143.665 bits (361), Expect = 2.785e-34
Identity = 72/109 (66.06%), Postives = 89/109 (81.65%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC-HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            Y+AED +G+IVGYVLAKMEEE ++  HGHITSLAV R+HR+LGLA KLM+ A  AM + F A+YVSLHVRKSNR A +LY+ TL ++I +VE KYYADGEDAY M++ L
Sbjct:   43 YIAEDEDGKIVGYVLAKMEEEPDDVPHGHITSLAVKRSHRRLGLAQKLMDQASRAMIENFNAKYVSLHVRKSNRPALHLYSNTLNFQISEVEPKYYADGEDAYAMKRDL 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1_SCHPO (N-terminal acetyltransferase A complex catalytic subunit ard1 OS=Schizosaccharomyces pombe GN=ard1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.585e-32
Identity = 67/108 (62.04%), Postives = 86/108 (79.63%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNEC--HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRK 321
            YVA D  GR+VGYVLAKMEEE  +   HGHITS++V+R++R LGLA +LM  +Q AM +V+GA+Y+SLHVRKSNRAA +LY +TL + +  +E+KYYADGEDAY M K
Sbjct:   43 YVATDPKGRVVGYVLAKMEEEPKDGIPHGHITSVSVMRSYRHLGLAKRLMVQSQRAMVEVYGAKYMSLHVRKSNRAAIHLYRDTLQFDVQGIESKYYADGEDAYAMHK 150          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1_DICDI (N-terminal acetyltransferase complex ARD1 subunit homolog OS=Dictyostelium discoideum GN=natA PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 2.698e-29
Identity = 66/109 (60.55%), Postives = 83/109 (76.15%), Query Frame = 1
Query:    4 YVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLK 330
            +VAED  G +VGYVLAK++E   +  GHITSLAVLR+ RKLG+ATKLM  A+ A+ +V+ A+ VSLHVRKSNRAAF+LY E L +KI ++E +YY D EDAY M   LK
Sbjct:   44 FVAEDDKGNVVGYVLAKIDENEPK-RGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHEVLKFKIDEIEKEYYGDKEDAYSMVLYLK 151          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: ARD1_YEAST (N-terminal acetyltransferase A complex catalytic subunit ARD1 OS=Saccharomyces cerevisiae GN=ARD1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.265e-25
Identity = 55/105 (52.38%), Postives = 78/105 (74.29%), Query Frame = 1
Query:   28 RIVGYVLAKMEEESNECH----GHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLK 330
            ++VGYVL KM ++ ++ +    GHITSL+V+RT+R++G+A  LM  A  A+ +V  AEYVSLHVR+SNRAA +LY +TL +++  +E  YY DGEDAY M+K LK
Sbjct:   91 KLVGYVLVKMNDDPDQQNEPPNGHITSLSVMRTYRRMGIAENLMRQALFALREVHQAEYVSLHVRQSNRAALHLYRDTLAFEVLSIEKSYYQDGEDAYAMKKVLK 195          
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Match: NAT5_DICDI (N-acetyltransferase 5 homolog OS=Dictyostelium discoideum GN=nat5 PE=3 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.938e-19
Identity = 46/109 (42.20%), Postives = 69/109 (63.30%), Query Frame = 1
Query:    1 LYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 327
            L +AED NG+ +GY++ K E E    HGH+T+++V    R++GLA +LM+  +   E+++   +V L VRKSN  A N+YT+  GY ++     YY+  EDA DMRK L
Sbjct:   43 LSMAEDVNGKPMGYMIGKAEGEGINWHGHVTAVSVAPEFRRIGLADRLMHILEEGSEKIYDGYFVDLFVRKSNTLAINMYTK-FGYSVYRTVIGYYSGDEDALDMRKAL 150          
The following BLAST results are available for this feature:
BLAST of BQ623391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
ARD1B_MOUSE4.297e-3566.06N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_MOUSE4.297e-3566.97N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_HUMAN4.297e-3566.97N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1A_BOVIN4.297e-3566.97N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1B_RAT2.133e-3465.14N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1B_HUMAN2.785e-3466.06N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1_SCHPO7.585e-3262.04N-terminal acetyltransferase A complex catalytic s... [more]
ARD1_DICDI2.698e-2960.55N-terminal acetyltransferase complex ARD1 subunit ... [more]
ARD1_YEAST5.265e-2552.38N-terminal acetyltransferase A complex catalytic s... [more]
NAT5_DICDI1.938e-1942.20N-acetyltransferase 5 homolog OS=Dictyostelium dis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00482 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00482 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623391 ID=BQ623391; Name=BQ623391; organism=Citrus sinensis; type=EST; length=374bp
CTCTACGTGGCCGAAGATTACAACGGCCGTATTGTCGGCTACGTATTGGC
TAAGATGGAAGAAGAAAGCAACGAGTGTCACGGCCACATCACCTCTCTCG
CCGTACTTCGCACGCATCGCAAGTTAGGATTGGCCACTAAGCTTATGAAT
GCTGCACAGTCAGCTATGGAACAGGTTTTTGGAGCAGAGTATGTCTCACT
GCATGTTAGGAAGAGTAACCGGGCAGCATTTAATTTGTACACAGAAACTT
TAGGTTATAAAATTCATGATGTGGAGGCAAAGTATTATGCTGATGGAGAG
GATGCATATGATATGCGGAAGCAGCTAAAAGGAAAGCAGAGTCATCAGCA
TGGGCACCACCACCACCACCACCA
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