BQ623418

Overview
NameBQ623418
Unique NameBQ623418
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length435
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig642 contig Csv1_Contig642:664..1098. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 3.757e-64
Identity = 118/141 (83.69%), Postives = 123/141 (87.23%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            HDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVI G
Sbjct:  158 HDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 3.757e-64
Identity = 118/141 (83.69%), Postives = 123/141 (87.23%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            HDVSVAKI+PQAPLDKVCLLGCGV TGLGAVWNTAKVE GSIVA+FGLGTV             SR+IGIDID KKFD AKNFGVTEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHKGWGTSVI G
Sbjct:  158 HDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.428e-63
Identity = 113/141 (80.14%), Postives = 122/141 (86.52%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            HDVSVAKI P APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA+FGLGTV             SR+IGIDID  K+D AKNFGVTEF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHKGWGTSVI G
Sbjct:  155 HDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVG 295          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 3.181e-63
Identity = 115/141 (81.56%), Postives = 121/141 (85.82%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            HDVSVAKIDP APLDKVCLLGCGVPTGLGAVWNTAKVEPGS VA+FGLGTV             SR+IGIDID KK++ AK FGV EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVI G
Sbjct:  156 HDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVG 296          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 7.086e-63
Identity = 118/141 (83.69%), Postives = 122/141 (86.52%), Query Frame = 1
Query:    1 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            HDVSVAKI+PQAPLDKVCLLGCGVPTGLGAVWNTAKVE GS+VAVFGLGTV             SRVIGIDID KKFD AKNFGVTEFVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC  KGWGTSVI G
Sbjct:  158 HDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVG 298          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 9.599e-52
Identity = 94/140 (67.14%), Postives = 110/140 (78.57%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+S+AK++ +AP+DKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IGID++P KF+ AK FG TEFVNPKDH KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHKGWG SVI G
Sbjct:  156 DISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIG 295          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 198.364 bits (503), Expect = 1.061e-50
Identity = 94/140 (67.14%), Postives = 108/140 (77.14%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAK+EPGS+ AVFGLG V             SR+IG+DI+  KF RAK FG TE +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+ G
Sbjct:  154 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.088e-50
Identity = 90/140 (64.29%), Postives = 109/140 (77.86%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+S+A +DP+APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             +R+IG+DI+P+KF +A  FG TE +NPKDH +P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHKGWG SVI G
Sbjct:  155 DISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIG 294          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 6.879e-50
Identity = 95/140 (67.86%), Postives = 105/140 (75.00%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+SVAKIDP APLDKVCLLGCG+ TG GA  NTAKVEPGS  AVFGLG V             SR+I +DI+  KF RAK FG TE +NP+D  KPIQ+VLV+ TDGGVDYSFECIGNV VMRAALE CHKGWG SV+ G
Sbjct:  154 DISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 293          
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 8.985e-50
Identity = 93/140 (66.43%), Postives = 107/140 (76.43%), Query Frame = 1
Query:    4 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIGG 423
            D+SVAKIDP APLDKVCLLGCGV TG GA  NTAKVEPGS  A+FGLG V             SR+IG+DI+  KF +AK FG +E +NP+D  KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHKGWG SV+ G
Sbjct:  154 DISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVG 293          
The following BLAST results are available for this feature:
BLAST of BQ623418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADHX_ORYSJ3.757e-6483.69Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI3.757e-6483.69Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_PEA1.428e-6380.14Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH3.181e-6381.56Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_MAIZE7.086e-6383.69Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_SPAAU9.599e-5267.14Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_HUMAN1.061e-5067.14Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHH_GADMO3.088e-5064.29Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_RABIT6.879e-5067.86Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HORSE8.985e-5066.43Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00509 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00509 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623418 ID=BQ623418; Name=BQ623418; organism=Citrus sinensis; type=EST; length=435bp
CATGATGTTAGTGTTGCAAAGATTGACCCACAAGCTCCTTTGGACAAAGT
ATGCCTTCTTGGCTGTGGTGTTCCTACTGGTCTTGGAGCAGTTTGGAACA
CTGCAAAAGTAGAGCCGGGTTCTATAGTTGCTGTTTTTGGCCTTGGGACT
GTTGGCCTTGCTGTGGCAGAGGGTGCAAAGGCAGCTGGAGCTTCACGTGT
TATTGGTATAGATATTGACCCGAAAAAGTTTGATAGAGCAAAGAATTTTG
GAGTTACTGAATTTGTAAATCCCAAGGACCATGACAAACCCATTCAGCAG
GTCCTTGTCGATCTCACGGATGGTGGTGTTGACTATAGTTTTGAATGCAT
TGGCAATGTCTCTGTGATGAGGGCAGCTTTGGAATGCTGTCACAAGGGCT
GGGGAACATCAGTTATTGGTGGGTGTTGCTGCATC
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