BQ623468

Overview
NameBQ623468
Unique NameBQ623468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6998 contig Csv1_Contig6998:248..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.797e-31
Identity = 68/117 (58.12%), Postives = 79/117 (67.52%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKNXXXXXXXXXXXQDQPLMSSNTSPLTNFPPLS-YDTN---DLSLAFARLQKQNGG---QLGFDDQ 498
            L+CPRCDSTNTKFCYYNNYSL+QPRYFCKSCRRYWTKGGTLRN+PVGGGC KN           +  P  +S+   + +    + Y  N   DLSLAFA L KQ+ G   QLGF  +
Sbjct:   55 LRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFALLNKQHPGSSSQLGFHSE 171          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30
Identity = 69/128 (53.91%), Postives = 79/128 (61.72%), Query Frame = 1
Query:  175 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKNXXXXXXXXXXXQDQPLMSSNTSPL-----TNFPPLSYDTN---DLSLAFARLQKQN----GGQLGFDDQHDFSILGN 522
            CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC +N            +   ++ +T PL     T  PP S+  +   DL+LAFA LQK +         F    D SI GN
Sbjct:   50 CPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSSSSAFSKNNNNKSINFHTDPLQNPLITGMPPSSFGYDHSIDLNLAFATLQKHHLSSQATTPSFGFGGDLSIYGN 177          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKNXXXXXXXXXXXQDQPLMSSNTSPLTN--FPPLSYDTN 432
            LKCPRCDS NTKFCYYNNYS+SQPRYFCK+CRRYWT GGTLRNVP+GGGC KN             + ++ S+TS  ++  + PLS  TN
Sbjct:   60 LKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKN---------KHASRFVLGSHTSSSSSATYAPLSPSTN 140          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF56_ARATH (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.598e-26
Identity = 47/52 (90.38%), Postives = 51/52 (98.08%), Query Frame = 1
Query:  172 KCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            KCPRC+ST+TKFCYYNNYSLSQPRYFCK+CRRYWTKGGTLRN+PVGGGC KN
Sbjct:   74 KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKN 125          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 62/121 (51.24%), Postives = 70/121 (57.85%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKNXXXXXXXXXXXQDQPLMSSNTSPLTN----------------FPPLSYDTNDLSLAFARLQKQNGGQL 483
            LKCPRC+S NTKFCYYNNYSLSQPR+FCKSCRRYWT+GG LRNVP+GGGC K              +P  S NT P ++                FPP +  T D  LA   L K N  QL
Sbjct:   41 LKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKKSI---------KPNSSMNTLPSSSSSQRFFSSIMEDSSKFFPPPT--TMDFQLAGLSLNKMNDLQL 150          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.267e-25
Identity = 62/120 (51.67%), Postives = 73/120 (60.83%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN-XXXXXXXXXXXQDQPLMSSNTSPLTNFPPLSYDTN---------DLSLAFARLQKQNGG---QLGF 489
            L+CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGG LRN+P+GG   K+              +P M+ +     +FP  S+  N         +L LA+A L KQ  G    LGF
Sbjct:   40 LRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGK---SFPTASFGYNNNNISNEQMELGLAYALLNKQPLGVSSHLGF 156          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 7.279e-25
Identity = 52/82 (63.41%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKNXXXXXXXXXXXQDQPLMSSNTSPLTNFPP 414
            LKCPRCDS NTKFCYYNNY+LSQPR+FCKSCRRYWTKGG LRNVPVGGG  KN              P  SS      N  P
Sbjct:   29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKRSTSSSSSASSPSNSSQNKKTKNPDP 110          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24
Identity = 44/53 (83.02%), Postives = 51/53 (96.23%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            LKCPRC+STNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LRNVPVGGGC +N
Sbjct:   89 LKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN 141          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF51_ARATH (Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 44/53 (83.02%), Postives = 51/53 (96.23%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            LKCPRCDSTNTKFCY+NNYSL+QPR+FCK+CRRYWT+GG LR+VPVGGGC +N
Sbjct:   95 LKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRN 147          
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.612e-24
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = 1
Query:  169 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCMKN 327
            LKCPRCDS+NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVGGGC +N
Sbjct:   77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRN 129          
The following BLAST results are available for this feature:
BLAST of BQ623468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF53_ARATH6.797e-3158.12Dof zinc finger protein DOF5.3 OS=Arabidopsis thal... [more]
DOF21_ARATH5.754e-3053.91Dof zinc finger protein DOF2.1 OS=Arabidopsis thal... [more]
PBF_MAIZE5.041e-2661.11Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=... [more]
DOF56_ARATH8.598e-2690.38Dof zinc finger protein DOF5.6 OS=Arabidopsis thal... [more]
DOF57_ARATH4.267e-2551.24Dof zinc finger protein DOF5.7 OS=Arabidopsis thal... [more]
DOF32_ARATH4.267e-2551.67Dof zinc finger protein DOF3.2 OS=Arabidopsis thal... [more]
DOF31_ARATH7.279e-2563.41Dof zinc finger protein DOF3.1 OS=Arabidopsis thal... [more]
DOF24_ARATH2.766e-2483.02Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
DOF51_ARATH3.612e-2483.02Dof zinc finger protein DOF5.1 OS=Arabidopsis thal... [more]
DOF11_ARATH3.612e-2483.02Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00559 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00559 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623468 ID=BQ623468; Name=BQ623468; organism=Citrus sinensis; type=EST; length=674bp
AAAATTCAACTTTGTTTCAATTATTCTGAAGACTGTTTGATTATTGTTGC
ATGGATGGATGCTTCAAGTGGACAACATCAGGAAATGGCTACTCATTCAT
TGGAAAGCATGTTGGTTTGCTCAAAAGCACAACAAGAAAGGAAGCCAAGG
CCTCAACCAGAACAAGCTCTCAAATGCCCAAGATGTGACTCCACCAACAC
AAAATTCTGCTACTACAACAACTACAGCCTCTCTCAGCCAAGATACTTCT
GCAAATCTTGCAGGAGGTATTGGACCAAAGGCGGCACACTCAGAAATGTT
CCGGTGGGTGGAGGGTGCATGAAAAACAAACGGTCGTCATCCTCGTCATC
AAAGAGAAGCCAAGATCAACCATTGATGAGTTCCAACACAAGCCCTCTCA
CCAATTTCCCTCCCTTGAGTTATGACACCAATGACTTGAGTCTTGCATTT
GCTAGGCTCCAAAAGCAAAACGGTGGGCAACTAGGGTTTGACGATCAGCA
TGATTTTTCTATTTTGGGGAACCCAGTAAGTAGCCACTGTGACATTCTTG
GAAACCCTAGCATTAGCAGCAGCACTTCAGCTACAACAACCCCAGCATTT
CTTGATGCACTAAGAAGTGGATTCCTAGACACCCACAACAATTTTCAGAA
TTTGTATTATGGGGTTTGGGAATG
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