BQ623472

Overview
NameBQ623472
Unique NameBQ623472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10330 contig Csv1_Contig10330:459..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.833e-39
Identity = 89/228 (39.04%), Postives = 138/228 (60.53%), Query Frame = 1
Query:    4 VNVDKTLFWRDYLKIHVHP-----QFNAPQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQ-NDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            V+ D+ L W D     V P         P+ PL F +T++ Y   V+ +A  L+  +  +L ++   ++K  D + DS Q + +N YPPCPQP+ V+GL PHSD   LT+LMQ ND  GL ++ DGKW+PV P P +F+VNIGD +EI++NG Y+S+ HR VVN +  R+S+AT H   +   VGPA+ L++ + +   ++ +  +EY     S  L+GK+ LD +++
Sbjct:  133 VSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEELEKLFD-DVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQ-KVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.518e-36
Identity = 80/199 (40.20%), Postives = 119/199 (59.80%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREY 609
            W D+L   V P  +      P+NP  +    +EY K +RE+ ++L   +   LG+E   +++A   + D   +L +N YPPCP+P++ +G+  H+D   LT+L+ N+  GL V  D +WI     P + V++IGD +EILSNGKYK+VLHR  VN   TR+S      PP DTVVGP   L+D+EN PP Y+  K+++Y
Sbjct:  129 WVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGD-DIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDEN-PPKYKAKKFKDY 325          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 84/218 (38.53%), Postives = 121/218 (55.50%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGP---PLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            WRD +  ++ P   + Q  P    E++ ++ K V++L   LL+ + E LGL+ SY++  MD     H     N YPPCPQPE+ MG   H+D G +TIL+Q+D  GL V H   W+ V P PGS VVNIGD +++LSN KY SV HRA+ N   +R+S+    G        + GP  +LL  +N PP YR    +++     +  L+G S L   K+
Sbjct:  150 WRDTIFCYMAPNPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDC---FHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGSRMSITCFFGESPYQSSKLYGPITELLSEDN-PPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 146.362 bits (368), Expect = 1.359e-34
Identity = 72/203 (35.47%), Postives = 118/203 (58.13%), Query Frame = 1
Query:   25 FWRDYLKIH----VHPQFNA-PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQL 618
            +WRD L++     V    N  P  P G  + I+++  + R++  ELL+ + E +G++  Y +  +   +  + +L +N YP CP P+  +G PPH D  L+T+L+     GL V + G WI V+P P +FVVN G  +E+++NG  KS+ HRA+ N    R SVAT   P  + ++GPA++ L  EN PP YR   +R+++++
Sbjct:  118 YWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADYFEGDL---SGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPGAVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKEN-PPCYRTTMFRDFMRI 316          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.165e-34
Identity = 83/218 (38.07%), Postives = 125/218 (57.34%), Query Frame = 1
Query:   28 WRDYLKIHVHPQFNAPQN-PLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPL---DTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSNQLNGKSCLDHVKV 669
            WRD L  +  P    P++ P    E + EY K V +L   L + + E+LGL  ++++   D++  +  LL+ + YPPCPQP++ +GL  HSD+  LTIL+Q+   GL V HD  W+ V P PG+ VVN+GD +++++N K+ SV HR + N    RISVA      L     V GP +++L  EN PP YR     EY +  +S   +G S L ++K+
Sbjct:  152 WRDTLGCYTAPDPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLK---DMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEEN-PPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.348e-33
Identity = 75/180 (41.67%), Postives = 107/180 (59.44%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P+NP  + E  +EY K +  +  +L + +   LGLE   ++KA   +   + LL +N YPPCP+P++ +G+  H+D   +TIL+ ND  GL    DG+W  V   P + V++IGD MEI+SNGKY SVLHR  VN   TRIS      PP D VVGP   L++  N+P  Y+  KY +Y+
Sbjct:  151 PKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEY-LLKINYYPPCPRPDLALGVVAHTDMSTVTILVPNDVQGLQACKDGRWYDVKYIPNALVIHIGDQMEIMSNGKYTSVLHRTTVNKDKTRISWPVFLEPPADHVVGPHPQLVNAVNQPK-YKTKKYGDYV 328          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 5.711e-33
Identity = 75/180 (41.67%), Postives = 108/180 (60.00%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYL 612
            P+NP  + E  +EY KR+RE+ + + K +   LGLE   + +A   +   + LL +N YPPCP+P++ +G+  H+D   +TIL+ N+  GL V  DG W  V   P + +V+IGD +EILSNGKYKSV HR  VN   TR+S      PP +  VGP   LL   N PP ++  KY++Y+
Sbjct:  162 PKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVY-LLKINYYPPCPRPDLALGVVAHTDMSYITILVPNEVQGLQVFKDGHWYDVKYIPNALIVHIGDQVEILSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEAN-PPKFKTKKYKDYV 339          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33
Identity = 75/208 (36.06%), Postives = 116/208 (55.77%), Query Frame = 1
Query:    7 NVDKTLFWRDYLKIHVHPQFNA-----PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQ 615
            N    L W DY    V+P+        PQ P  + E   EY K++RELA ++LK +   LGL+E  ++K +    +    + +N YP CPQPE+ +G+  H+D   LT ++ N   GL + ++GKW+     P S V++IGD +EILSNGKYKS+LHR +VN +  RIS A    PP + ++        +E+ P ++    + E++Q
Sbjct:  136 NASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPNSIVMHIGDTLEILSNGKYKSILHRGMVNKEKVRISWAVFCEPPKEKIILKPLPETVSEDEPAMFPPRTFAEHIQ 343          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.834e-32
Identity = 69/178 (38.76%), Postives = 111/178 (62.36%), Query Frame = 1
Query:   91 FSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETDSHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHV-GLHVRHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNE-NRPPLYRGIKYREYLQL 618
            + + ++E+   + +LA E+L  + E+LGLE+ Y++K        +    V+ YPPCP+PE++ GL  H+D G L +L Q+D V GLHV  DGKW+ V P   S V+N+GD +E+++NGKYKSV+HR +      R+S+A+ + P  D V+ PA  L++ E  +  LY    + +Y++L
Sbjct:  111 YKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPMHHSIVINLGDQLEVITNGKYKSVMHRVIAQEDGNRMSIASFYNPGNDAVIYPAPALVEGEQEKTKLYPKFVFDDYMKL 288          
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.701e-32
Identity = 80/190 (42.11%), Postives = 117/190 (61.58%), Query Frame = 1
Query:   73 PQNPLGFSETIQEYCKRVRELANELLKGIMESLGLEESYIQKAMDLETD---SHQLLVVNLYPPCPQPEVVMGLPPHSDHGLLTILMQNDHVGLHV-RHDGKWIPVNPPPGSFVVNIGDHMEILSNGKYKSVLHRAVVNGKATRISVATAHGPPLDTVVGPAQDLLDNENRPPLYRGIKYREYLQLQQSN 630
            PQ+ L + + ++EY + +++LA++L+   + SLG+ E  I+ A  L +D   +   L +N YP CP+P+  MGL  H+D  LLTIL QN+  GL V R D  W+ V P PGS VVN+GD   ILSNG +KSVLHRA VN    R+SVA   GP  D  + P   L+ +    PLY+ + ++EYL+ + ++
Sbjct:  157 PQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWA-SLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQNNTAGLQVFRDDLGWVTVPPFPGSLVVNVGDLFHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLV-SPVESPLYQSVTWKEYLRTKATH 344          
The following BLAST results are available for this feature:
BLAST of BQ623472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
SRG1_ARATH1.833e-3939.04Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FLS_CITUN5.518e-3640.20Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
ACCH3_SOLLC1.606e-3538.531-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
IDS3_HORVU1.359e-3435.472'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
ACCH1_ARATH5.165e-3438.071-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FLS_MALDO3.348e-3341.67Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_PETHY5.711e-3341.67Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
LDOX_MALDO7.458e-3336.06Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
ACCO3_CUCME2.834e-3238.761-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
G3OX1_ARATH3.701e-3242.11Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00563 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00563 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623472 ID=BQ623472; Name=BQ623472; organism=Citrus sinensis; type=EST; length=681bp
GGCGTTAATGTCGACAAGACATTATTCTGGAGGGATTACCTGAAGATCCA
CGTCCATCCCCAGTTCAATGCTCCTCAAAACCCTCTTGGCTTCAGTGAAA
CCATACAAGAATATTGCAAAAGAGTTCGAGAATTGGCCAATGAATTACTG
AAAGGGATTATGGAAAGCTTAGGATTGGAAGAAAGCTACATACAAAAGGC
AATGGATCTTGAGACAGACTCTCATCAGTTGCTTGTCGTCAATTTATACC
CTCCTTGTCCACAGCCAGAAGTAGTGATGGGGCTGCCCCCTCATTCGGAT
CATGGCCTCTTAACCATCCTTATGCAGAATGACCATGTAGGTCTTCACGT
ACGGCACGATGGCAAATGGATTCCCGTCAATCCTCCACCCGGCTCTTTCG
TAGTCAACATAGGAGACCACATGGAGATACTAAGTAACGGAAAGTACAAG
AGCGTGTTGCACAGAGCAGTAGTGAACGGCAAAGCAACAAGAATCTCCGT
TGCAACAGCACACGGGCCTCCTCTTGACACGGTCGTGGGCCCTGCTCAGG
ATTTGCTTGACAATGAGAACCGACCCCCGTTGTATCGTGGGATCAAATAT
AGAGAGTATTTGCAGCTTCAACAGAGCAATCAACTGAATGGGAAATCCTG
CTTGGACCACGTCAAAGTCAATATCAATGAT
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