BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 7.527e-78
Identity = 141/171 (82.46%), Postives = 152/171 (88.89%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            ALDWNTRK+IAIGAARGL YLHEQCDPKIIHRDVKAAN+LLD++ EA+VGDFGLAKLL+H DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS++QKGAMLEW              DRELG+ YDRIEVGE+LQVALLCTQ+LP HRPK
Sbjct:  390 ALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPK 560          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 1.927e-57
Identity = 108/171 (63.16%), Postives = 132/171 (77.19%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            LDW TRKRIA+G+ARGL YLH+ CDPKIIHRDVKAAN+LLD+  EA+VGDFGLAKL+D+ D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+GI+LLELITG RA +  +  N    M L+W              D +L +NY+  E+ +++QVALLCTQ  P+ RPK
Sbjct:  398 LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPK 568          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.632e-56
Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            +LDWN R  IA+GAARGL+YLHEQC+PKIIHRDVKAAN+LLD+  EAIVGDFGLAKLLD  DSHVTTAVRGT+GHIAPEYLSTGQSSEKTDVFGFG+L+LELITG + ++ G    +KG +L W              DR+L   +D + + E++++ALLCTQ  P  RP+
Sbjct:  394 SLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPR 564          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 8.098e-56
Identity = 106/171 (61.99%), Postives = 129/171 (75.44%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            LDW  R+RIA+G+ARGL YLH+ CDPKIIHRDVKAAN+LLD+  EA+VGDFGLAKL+D+ D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG RA +  +  N    M L+W              D +L  NY   EV +++QVALLCTQ  P+ RPK
Sbjct:  385 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK 555          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.804e-55
Identity = 105/171 (61.40%), Postives = 130/171 (76.02%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            L W+ R++IA+G+ARGL YLH+ CDPKIIHRDVKAAN+LLD+  EA+VGDFGLA+L+D+ D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+GI+LLELITG RA +  +  N    M L+W              D +L SNY   EV +++QVALLCTQ  P+ RPK
Sbjct:  401 LAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPK 571          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 1.688e-53
Identity = 103/172 (59.88%), Postives = 127/172 (73.84%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            ALDW  RK IA+G+ARGL YLH+ CD KIIHRDVKAAN+LLD+  EA+VGDFGLAKL++++DSHVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG +A +  +  N    M L+W              D EL   Y   EV +++Q+ALLCTQ   + RPK
Sbjct:  389 ALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPK 560          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.094e-52
Identity = 102/172 (59.30%), Postives = 126/172 (73.26%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM-LEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRPK 514
            ALDW  RK IA+G+ARGL YLH+ CD KIIH DVKAAN+LLD+  EA+VGDFGLAKL++++DSHVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITG +A +  +  N    M L+W              D EL   Y   EV +++Q+ALLCTQ   + RPK
Sbjct:  370 ALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPK 541          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.133e-49
Identity = 101/170 (59.41%), Postives = 124/170 (72.94%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGA-MLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TRKRIA+GAARG  YLHE C+PKIIHRDVKAANVLLD+  EA+VGDFGLAKL+D   ++VTT VRGT+GHIAPEYLSTG+SSE+TDVFG+GI+LLEL+TG RA++F +   +    +L+               D+ L   Y + EV  ++QVALLCTQ  P  RP
Sbjct:  386 LDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRP 555          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 1.029e-34
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW TR++I IG ARGL YLHE+   KI+HRD+KA NVLLD      + DFGLAKL +   +H++T + GT G++APEY   G  ++K DV+ FGI+ LE++ G R+ +  +S N    +++W              D  LGS Y+R E   ++Q+A++CT   P  RP
Sbjct:  719 LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHG-RSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERP 886          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 1.486e-33
Identity = 74/170 (43.53%), Postives = 105/170 (61.76%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKG-AMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            LDW++R  I IGAA+GL YLH  C P+IIHRD+K++N+LLD   EA V DFGLAKLL+  +SH+TT V GT G++APEY+ +G+++EKTDV+ FG+L+LE+++G   L    S  +KG  ++ W              D       +R  +  +L +A  C    P  RP
Sbjct:  396 LDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSG--KLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLSC-EGVERESLDALLSIATKCVSSSPDERP 562          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y2239_ARATH7.527e-7882.46Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH1.927e-5763.16Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y5457_ARATH1.632e-5663.16Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH8.098e-5661.99BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK2_ARATH1.804e-5561.40Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK4_ARATH1.688e-5359.88Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH1.094e-5259.30Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH1.133e-4959.41Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH1.029e-3442.60Probable LRR receptor-like serine/threonine-protei... [more]
FEI2_ARATH1.486e-3343.53LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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