BQ623496

Overview
NameBQ623496
Unique NameBQ623496
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9137 contig Csv1_Contig9137:67..698. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H43_ARATH (Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis thaliana GN=At3g48440 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.748e-57
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 2
Query:    8 SWSSPRALNEPAPFVPMMYSPTPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQ--PQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYG---LDPP 502
            SWSSPR +N  +PF+P+M S T GV SQN EWNGYQ+ +Y  ER V S  T  + NN   +   ++ Q   QM   EFPERP QPECSY+++TGDCK+K NCKYHHPKNR+PK PP  L+DKGLPLRP QN+C+YYSRYGICKFGPAC++DH + P  S E     ++PP
Sbjct:  266 SWSSPRHVNGTSPFIPVMLSQTHGVTSQNPEWNGYQASVYSSERGVFSPSTTYLMNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDHSVQPPYSTESSQAIVEPP 435          

HSP 2 Score: 80.8777 bits (198), Expect = 6.054e-15
Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  173 NNPLVDNVQIIHQPQMLVGEFPE-RPGQPECSYFLRTGDCKYKSNCKYHH--PKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDS 520
            N+PL    QI    ++   E    + G  +C Y+ RTG CKY   C+++H  PK+ +  +P   L+  GLPLRPG+  C YY R G CK+G  CK++   HPD +   G D P   G++
Sbjct:  134 NHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAP--ELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFN---HPDPTTIGGTDSPSFRGNN 247          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H67_ARATH (Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis thaliana GN=At5g63260 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 1.865e-48
Identity = 90/160 (56.25%), Postives = 114/160 (71.25%), Query Frame = 2
Query:    8 SWSSPRALNEP--APFVPMMYSPTPGVPSQNSEWNGYQ-SPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDAS 478
            SWSS R +N    APF+P M+  + GV  Q S+WNGYQ S  YP ERS  +  +Y +NN+    +    +Q QM V EFPERP QPEC+Y+L+TGDCK+K  CKYHHPKNR+PK    + +DKGLPLRP Q++C++YSRYGICKFGPAC++DH I P  S
Sbjct:  253 SWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIPPTFS 412          

HSP 2 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 2
Query:  173 NNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPP 502
            N+P+   +QI  +      E  E P   EC Y+ RTG CKY  +C++ H K     +    L+  GLP+RPG+  C +Y R G CKFG  CK++   HPD +A  G+D P
Sbjct:  125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFN---HPDPTAIGGVDSP 231          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H65_ORYSJ (Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa subsp. japonica GN=Os12g0278800 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.173e-32
Identity = 71/162 (43.83%), Postives = 96/162 (59.26%), Query Frame = 2
Query:   11 WSSPRALNEP-APFVPMMYSPTPGV-PSQNS----EWNGYQ----SPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIH 466
            W   R +NE   PF+    S + G+ P Q      EWNGY     +P YP     Q  P   IN+ P+    +I    Q+   E+PERPGQPEC +F+++G CK++  CKYHHP++ +P  P   LS  GLP++P Q VC+YY RYG+CKFGPAC Y+HP +
Sbjct:  347 WPDQRTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPINH-PMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVP--PAGALSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFN 505          

HSP 2 Score: 68.1662 bits (165), Expect = 4.061e-11
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 2
Query:  239 ERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPP--CTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            E   Q EC Y+   G CK+   CKY H   +  K+      L+  GLPLRPG+  C YY R G CK+   CK+ HP
Sbjct:  236 EGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHP 311          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H13_ARATH (Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis thaliana GN=At1g48195 PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 9.297e-32
Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = 2
Query:  230 EFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDH 457
            +FPERPG+PECSY+LRTG+C  K NCKYHHPKN  P  P CTL+DKGLPLRPGQ +C +YSR+GIC+ GP CK+DH
Sbjct:    5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKFDH 80          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H63_ORYSJ (Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa subsp. japonica GN=Os11g0472000 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.870e-31
Identity = 57/100 (57.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPSFGDSTTRQ 532
            FPERP QPEC ++++TGDCK+ + CK+HHPK RI  +P C LS  GLPLRPG+ +C++YSRYGICKFGP CK+DHP+    +  YGL   P+ GD + R+
Sbjct:  306 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPM---GTVMYGLATSPT-GDVSARR 401          

HSP 2 Score: 99.7525 bits (247), Expect = 1.259e-20
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GE+P+R GQPEC Y+L+TG CK+ + CK+HHP+ +   +    L+  G PLRP +  C+YY R G CKFG  CK+ HP
Sbjct:   96 GEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCKFGSTCKFHHP 173          

HSP 3 Score: 83.1889 bits (204), Expect = 1.220e-15
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 2
Query:  218 MLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            M  G +PER G+P+CSY++RTG C++   CK++HP +R  K        KG  P R GQ  C YY + G CKFG  CK+ HP
Sbjct:   48 MEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADR--KMAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHP 127          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H57_ARATH (Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis thaliana GN=ZFN3 PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 1.484e-29
Identity = 52/92 (56.52%), Postives = 67/92 (72.83%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDASAEYGLDPPPS 508
            FPERPGQPEC ++++TGDCK+ + CK+HHP++R    P C LS  GLPLRPG+ +C +YSRYGICKFGP+CK+DHP+           P PS
Sbjct:  240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASPSPS 331          

HSP 2 Score: 97.0561 bits (240), Expect = 8.163e-20
Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GE+PER GQPEC ++L+TG CK+   CK+HHP+N+       +++    PLRP ++ CSY+ R G CKFG  CK++HP
Sbjct:   82 GEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHP 159          

HSP 3 Score: 81.2629 bits (199), Expect = 4.635e-15
Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            G +PER G+P+C+Y++RTG C++ S C+++HP +R  K    T   KG  P R GQ  C +Y + G CKFG  CK+ HP
Sbjct:   37 GSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDR--KLVIATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHP 113          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H66_ORYSJ (Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa subsp. japonica GN=Os12g0405100 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29
Identity = 49/77 (63.64%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            FPERP QPEC ++++TGDCK+ + CK+HHPK R+  +P C L+  GLPLRPG+ VC++YSRYGICKFGP CK+DHP+
Sbjct:  315 FPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPM 391          

HSP 2 Score: 95.1301 bits (235), Expect = 3.102e-19
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GE+P R GQPEC Y+L+TG CK+ + CK+HHP+ +   +    L+  G P+RP +  C+YY R G CKF   CK+ HP
Sbjct:  106 GEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHHP 183          

HSP 3 Score: 82.0333 bits (201), Expect = 2.718e-15
Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            +PER G+P+CSY++RTG C++   CK++HP NR        ++ +  P R GQ  C YY + G CKFG  CK+ HP
Sbjct:   63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNGE-YPYRVGQPECQYYLKTGTCKFGATCKFHHP 137          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H33_ARATH (Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis thaliana GN=ZFN1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28
Identity = 48/77 (62.34%), Postives = 64/77 (83.12%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            FPERPGQPEC ++++TGDCK+ + CK+HHP++R    P C LS  GLPLRPG+ +C +Y+RYGICKFGP+CK+DHP+
Sbjct:  271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPM 347          

HSP 2 Score: 95.9005 bits (237), Expect = 1.819e-19
Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GE+PER GQPEC Y+L+TG CK+   CK+HHP+N+   +   +L+  G PLR  +  C+Y+ R G CKFG  CK++HP
Sbjct:   80 GEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKFNHP 157          

HSP 3 Score: 86.6557 bits (213), Expect = 1.103e-16
Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2
Query:  218 MLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKG-LPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            M  G +PERPG+P+CSY++RTG C++ S C+++HP++R  +    T   +G  P R GQ  C YY + G CKFG  CK+ HP
Sbjct:   32 METGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDR--ELVIATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHP 111          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H12_ORYSJ (Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=Os01g0917400 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.799e-28
Identity = 60/130 (46.15%), Postives = 74/130 (56.92%), Query Frame = 2
Query:   71 TPGVPSQNSEWNGYQSPLYPQERSVQSAPTYVINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            T G   Q     G Q  L P   S    P Y +      +NV            FPERP QPEC Y+++TGDCK+ + CK+HHP+ R   +P C LS  GLPLRPG+ +C +YSRYGICKFG  CK+DHP
Sbjct:  291 TYGTSQQVDASAGNQGMLSPYRSSSYPVPQYALQR----ENV------------FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHP 404          

HSP 2 Score: 97.4413 bits (241), Expect = 6.250e-20
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            GE+PER GQPEC Y+L+TG CK+   CK+HHP+ +   +    L+  G PLRP +  C+YY + G CK+G  CK+ HP
Sbjct:  120 GEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHP 197          

HSP 3 Score: 85.5001 bits (210), Expect = 2.458e-16
Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2
Query:   41 APFVPMMYSPTPGVPSQNSEWNGYQSPLYPQERSVQSAPTY---VINNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            AP  P+   P P  PSQ            P   +    P++    +    +   + +     M  G +PER G+P+C+Y+LRTG C++  +C+++HP++R        +  +  P R GQ  C YY + G CKFGP CK+ HP
Sbjct:   21 APTPPLPPPPPPPPPSQ-----------LPATAAATDEPSHDPAALYGEGMWQQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGE-YPERMGQPECQYYLKTGTCKFGPTCKFHHP 151          
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Match: C3H34_ARATH (Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis thaliana GN=At3g06410 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.236e-28
Identity = 63/156 (40.38%), Postives = 87/156 (55.77%), Query Frame = 2
Query:   41 APFVPMMYSPTPGVPSQNSEWNGYQSPLYPQ-----ERSVQSAPTYVI-----NNNPLVDNVQIIHQPQMLVGEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPIHPDAS 478
            +P+ P M  P   VP   S WN YQ+ L        + S+ S+  Y +     +        Q +        EFP+RP QPEC YF+RTGDCK+ S+C+YHHP + +P      LS  GLPLRPG   C++++++GICKFGPACK+DH +    S
Sbjct:  232 SPYGPPMVLPPGMVPY--SGWNPYQASLSAMPSPGTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLS 385          

HSP 2 Score: 95.1301 bits (235), Expect = 3.102e-19
Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 2
Query:  227 GEFPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSP--PCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHPI 463
            G  PER G P C +F+RTG CK+ ++CKYHHP+         P +LS  G PLRPG+  CSYY R G CKFG  C+++HP+
Sbjct:   95 GALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPV 175          

HSP 3 Score: 82.8037 bits (203), Expect = 1.593e-15
Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 2
Query:  233 FPERPGQPECSYFLRTGDCKYKSNCKYHHPKNRIPKSPPCTLSDKGLPLRPGQNVCSYYSRYGICKFGPACKYDHP 460
            +PERP +P+C Y+LRTG C Y S C+++HP++R             LP R G  VC ++ R G CKFG +CKY HP
Sbjct:   51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHP 126          
The following BLAST results are available for this feature:
BLAST of BQ623496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
C3H43_ARATH3.748e-5758.82Zinc finger CCCH domain-containing protein 43 OS=A... [more]
C3H67_ARATH1.865e-4856.25Zinc finger CCCH domain-containing protein 67 OS=A... [more]
C3H65_ORYSJ4.173e-3243.83Zinc finger CCCH domain-containing protein 65 OS=O... [more]
C3H13_ARATH9.297e-3271.05Zinc finger CCCH domain-containing protein 13 OS=A... [more]
C3H63_ORYSJ7.870e-3157.00Zinc finger CCCH domain-containing protein 63 OS=O... [more]
C3H57_ARATH1.484e-2956.52Zinc finger CCCH domain-containing protein 57 OS=A... [more]
C3H66_ORYSJ3.307e-2963.64Zinc finger CCCH domain-containing protein 66 OS=O... [more]
C3H33_ARATH1.257e-2862.34Zinc finger CCCH domain-containing protein 33 OS=A... [more]
C3H12_ORYSJ2.799e-2846.15Zinc finger CCCH domain-containing protein 12 OS=O... [more]
C3H34_ARATH6.236e-2840.38Zinc finger CCCH domain-containing protein 34 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00587 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00587 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623496 ID=BQ623496; Name=BQ623496; organism=Citrus sinensis; type=EST; length=631bp
TATAGGATCCTGGTCATCACCTAGGGCTTTAAATGAACCTGCTCCCTTTG
TGCCAATGATGTATTCACCAACTCCAGGGGTTCCTTCTCAAAATTCAGAA
TGGAATGGGTATCAGTCTCCTCTATATCCACAAGAAAGGAGCGTGCAGTC
AGCCCCCACGTATGTCATAAACAACAACCCATTGGTAGATAATGTCCAGA
TAATTCATCAGCCGCAGATGCTAGTTGGTGAGTTCCCAGAACGACCTGGC
CAGCCTGAGTGCAGTTACTTCCTAAGAACGGGAGACTGTAAGTATAAGTC
TAATTGCAAATATCATCATCCAAAAAATCGAATCCCTAAGTCACCACCAT
GCACTCTCAGCGACAAGGGTCTGCCACTGCGGCCTGGTCAAAACGTCTGT
TCATATTATAGCCGCTATGGCATTTGCAAGTTTGGGCCGGCTTGTAAATA
TGATCATCCGATACATCCAGATGCTTCAGCTGAGTATGGGCTAGATCCGC
CTCCATCATTTGGCGACTCTACAACTAGGCAAGAGACTGGAATGGCTGGA
ACTGGAAACGGAAATGGGGGTGACAAGAACATTTAGCAGCCTGTGTAATT
TTTTTTTGCATCGAGGGCTCTCTAGATTTTA
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