BQ623512
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.842e-44 Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTILDTFIS 286 EVLVIGYIEFQRN+ELD EKRLYPGGKFFDPLGLAADPEK A LQLAEIKHARLAMVAFLGFAVQA TGKGPLNNWATHLSDPLHTTI+DTF S Sbjct: 195 EVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 289
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB4B_ARATH (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.560e-43 Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTILDTFIS 286 EVLVIGYIEFQRN+ELD EKRLYPGGKFFDPLGLA+DP KKA LQLAEIKHARLAMV FLGFAVQA TGKGPLNNWATHLSDPLHTTI+DTF S Sbjct: 192 EVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSS 286
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB4C_ARATH (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.3 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 3.157e-28 Identity = 63/79 (79.75%), Postives = 71/79 (89.87%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWAT 238 EVLV+GYIEFQRNSELDPEKR+YPGG +FDPLGLAADPEK TL+LAEIKH+RLAMVAFL FA+QA TGKGP++ AT Sbjct: 196 EVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.133e-20 Identity = 53/95 (55.79%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAV-QAVVTGKGPLNNWATHLSDPLHTTILDTFI 283 E L I + E QR E DPEK+ YPGG F DPLG + DP K L+L EIK+ RLAM+AF+GF V Q+ G GPL N ATHL+DP H I D I Sbjct: 145 EFLAIAFAEQQRTMEKDPEKKKYPGGAF-DPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVI 238
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.794e-19 Identity = 50/91 (54.95%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 2 EVLVIGYIEFQR-NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLHTTIL 271 EV+++G E+ R + LD E +L+PGG F DPLGLA DPE+ A L++ EIK+ RLAM A LGF +QA VTG+GP+ N A HLSDP +L Sbjct: 178 EVVLLGGAEYYRITNGLDFEDKLHPGGPF-DPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLL 267
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.018e-18 Identity = 49/95 (51.58%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAV-QAVVTGKGPLNNWATHLSDPLHTTILDTFI 283 E L I ++E QR+ E D EK+ YPGG F DPLG + DP K L++ EIK+ RLA++A +GF V Q+ G GPL N ATHL+DP H I D I Sbjct: 146 EFLAIAFVEHQRSMEKDSEKKKYPGGAF-DPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVII 239
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17 Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDPEKRLYPGGKFFDPLGLAADPEKKA-TLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWA 235 EV+++G EF RNSE +PEKR YPGG FDPL LA++ E++A L+ AEIKHARLAMV+F G+ VQA+ TG+G L + A Sbjct: 191 EVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 268
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.920e-17 Identity = 47/88 (53.41%), Postives = 60/88 (68.18%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELD---PEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPL 256 +VL++G +E R + LD LYPGG++FDPLGLA DP A L++ EIK+ RLAM + GF VQA+VTGKGPL N HL DP+ Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPV 253
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.507e-17 Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 2 EVLVIGYIEFQRNSELDP----EKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R + P E LYPGG F DPLGLA DPE A L++ EIK+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 164 QVILMGAVEGYRVAGEGPLGEAEDLLYPGGSF-DPLGLATDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 252
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.586e-17 Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 2 EVLVIGYIEFQR------NSELDPEKRLYPGGKFFDPLGLAADPEKKATLQLAEIKHARLAMVAFLGFAVQAVVTGKGPLNNWATHLSDPLH 259 +V+++G +E R +DP LYPGG F DPLGLA DPE+ A L++ E+K+ RLAM + GF VQA+VTGKGPL N A HL+DP++ Sbjct: 163 QVILMGAVEGYRVAGGPLGEIVDP---LYPGGSF-DPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVN 250 The following BLAST results are available for this feature:
BLAST of BQ623512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623512 ID=BQ623512; Name=BQ623512; organism=Citrus sinensis; type=EST; length=522bpback to top |