BQ623527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM4_ARATH (Thioredoxin M-type 4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360 PE=1 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 4.220e-42 Identity = 77/135 (57.04%), Postives = 97/135 (71.85%), Query Frame = 2 Query: 14 KFAEFKGLKVRPXXXXXXXXXXXXXXXXLRRGAQIVCEAQET---AVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 +F EF+GLK + RG +I CEAQ+T AVEVP ++D+ WQ+ VL+S PVLVEFWAPWCGPCRMIHPI+D+L+K + GK K YK+NTDESP+ A RYGIRS+PTV+IFK GEKKD++ Sbjct: 40 RFLEFRGLKSSRSLVTQSASLGANRRTRIARGGRIACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSI 174 HSP 2 Score: 27.335 bits (59), Expect = 4.220e-42 Identity = 12/23 (52.17%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ S +GAVP+ TL +IE+FL Sbjct: 169 EKKDSIIGAVPRETLEKTIERFL 191
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.426e-39 Identity = 65/104 (62.50%), Postives = 87/104 (83.65%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 LRRG I+CEAQ+TA +P V D+TW+SLVL + PV+V+FWAPWCGPC+MI PI++EL++QY GK+K +K+NTD+SP+ +YG+RSIPT+MIF GEKKDT+ Sbjct: 57 LRRGG-IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMIDPIVNELAQQYTGKIKFFKLNTDDSPATPGKYGVRSIPTIMIFVKGEKKDTI 159 HSP 2 Score: 31.5722 bits (70), Expect = 2.426e-39 Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ + +GAVPK+TL TSI+KFL Sbjct: 154 EKKDTIIGAVPKTTLATSIDKFL 176
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.805e-38 Identity = 65/98 (66.33%), Postives = 82/98 (83.67%), Query Frame = 2 Query: 116 IVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 ++ A+E EV V D++W LV+ S +PVLV+FWAPWCGPCRMI PIIDEL+K+Y GK+KCYK+NTDESP+ AT+YGIRSIPTV+ FKNGE+KD+V Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSV 155 HSP 2 Score: 28.1054 bits (61), Expect = 5.805e-38 Identity = 11/23 (47.83%), Postives = 18/23 (78.26%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E + S +GAVPK+TL+ +EK++ Sbjct: 150 ERKDSVIGAVPKATLSEKVEKYI 172
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 5.805e-38 Identity = 66/104 (63.46%), Postives = 82/104 (78.85%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 LR ++ C+ EV + W S+VL S +PVLVEFWAPWCGPCRMI P+IDEL+K+YVGK+KC KVNTD+SP+IAT YGIRSIPTV++FKNGEKK++V Sbjct: 50 LRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESV 153 HSP 2 Score: 28.8758 bits (63), Expect = 5.805e-38 Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ S +GAVPK+TL T I+K++ Sbjct: 148 EKKESVIGAVPKTTLATIIDKYV 170
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.555e-38 Identity = 65/104 (62.50%), Postives = 85/104 (81.73%), Query Frame = 2 Query: 98 LRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 LRRG ++CEAQ+TA +P V D+TW SLVL + PV V+FWAPWCGPC+MI PI++EL+++Y G+ K YK+NTDESP+ +YG+RSIPT+MIF NGEKKDT+ Sbjct: 61 LRRG--VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNGEKKDTI 162 HSP 2 Score: 27.335 bits (59), Expect = 7.555e-38 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ + +GAV K TL TSI KFL Sbjct: 157 EKKDTIIGAVSKDTLATSINKFL 179
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.669e-37 Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 2 Query: 2 SGRRKFA---EFKGLKVRPXXXXXXXXXXXXXXXXLRRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 S RR FA E GL++R R A +VCEAQET ++ V D+TW SLVL + PV+V+FWAPWCGPC+MI P++++L++ Y GK+K YK+NTDESP+ +YG+RSIPT+MIF GEKKDT+ Sbjct: 31 SSRRMFAVLPESSGLRIRLSLSPASLTSIHQPRVSRLRRA-VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKKDTI 168 HSP 2 Score: 31.187 bits (69), Expect = 1.669e-37 Identity = 13/23 (56.52%), Postives = 21/23 (91.30%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ + +GAVPK+TLT+S++KFL Sbjct: 163 EKKDTIIGAVPKTTLTSSLDKFL 185
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 8.163e-37 Identity = 59/102 (57.84%), Postives = 82/102 (80.39%), Query Frame = 2 Query: 104 RGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 R + +VC+A E EV V D++W+ VL+S PV+V+FWAPWCGPC++I P+IDEL+K+Y GK+ YK+NTDE+P IAT+Y IRSIPTV+ FKNGE+K+++ Sbjct: 61 RYSSVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESI 162 HSP 2 Score: 33.4982 bits (75), Expect = 8.163e-37 Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E + S +GAVPKSTLT SIEK+L Sbjct: 157 ERKESIIGAVPKSTLTDSIEKYL 179
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.498e-35 Identity = 62/103 (60.19%), Postives = 81/103 (78.64%), Query Frame = 2 Query: 101 RRGAQIVCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 RR ++ VC+ + EV + W ++V+ SPVLVEFWAPWCGPCRMI P+IDEL+K YVGK+KC KVNTD+ P+IA+ YGIRSIPTV++FK+GEKK++V Sbjct: 54 RRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAPVIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESV 156 HSP 2 Score: 28.8758 bits (63), Expect = 1.498e-35 Identity = 12/23 (52.17%), Postives = 19/23 (82.61%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ S +GAVPK+TL T I+K++ Sbjct: 151 EKKESVIGAVPKTTLCTIIDKYI 173
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.319e-35 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 2 Query: 119 VCEAQETAVEVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 VC+++ EV + W LV+ +PVLVEFWAPWCGPCRMI P+IDEL+K Y GK+ C KVNTD+SP++A+ YGIRSIPTV+IFK GEKK++V Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGKITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESV 147 HSP 2 Score: 32.3426 bits (72), Expect = 4.319e-35 Identity = 14/23 (60.87%), Postives = 20/23 (86.96%), Query Frame = 1 Query: 394 EERYSGLGAVPKSTLTTSIEKFL 462 E++ S +GAVPKSTLTT I+K++ Sbjct: 142 EKKESVIGAVPKSTLTTLIDKYI 164
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 1.692e-30 Identity = 53/88 (60.23%), Postives = 74/88 (84.09%), Query Frame = 2 Query: 146 EVPAVTDATWQSLVLDSGSPVLVEFWAPWCGPCRMIHPIIDELSKQYVGKLKCYKVNTDESPSIATRYGIRSIPTVMIFKNGEKKDTV 409 E AV D T++++VL+S PVLV+FWAPWCGPCR+I P++DE++ +Y KLKC K+NTDESP++A+ YGIRSIPT+M+FK G+K +T+ Sbjct: 35 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETI 122 HSP 2 Score: 26.1794 bits (56), Expect = 1.692e-30 Identity = 9/17 (52.94%), Postives = 15/17 (88.24%), Query Frame = 1 Query: 412 LGAVPKSTLTTSIEKFL 462 +GAVPK+T+ ++EK+L Sbjct: 123 IGAVPKATIVQTVEKYL 139 The following BLAST results are available for this feature:
BLAST of BQ623527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623527 ID=BQ623527; Name=BQ623527; organism=Citrus sinensis; type=EST; length=569bpback to top |