BQ623533

Overview
NameBQ623533
Unique NameBQ623533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
BQ623533_ssr126 microsatellite BQ623533_ssr126:126..137. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10852 contig Csv1_Contig10852:59..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623533 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.225e-27
Identity = 62/157 (39.49%), Postives = 91/157 (57.96%), Query Frame = 3
Query:   51 PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDGG 512
            P++D +G++++    YY++S+I               + CP  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D G
Sbjct:   30 PVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of BQ623533 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 2.719e-25
Identity = 64/177 (36.16%), Postives = 91/177 (51.41%), Query Frame = 3
Query:    9 VLTFATKPLVGLAD----PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMYD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDGG 512
            +L  A  PL+  AD    P++D++G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E   G    YK+V CP+VC SC   C D G
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGS-GFYKLVFCPTVCGSCKVKCGDVG 192          
BLAST of BQ623533 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15
Identity = 55/155 (35.48%), Postives = 80/155 (51.61%), Query Frame = 3
Query:   51 PLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMYD--KTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCND 506
            P+VD++G  V    DY++VSAI              N+  CPL VVQ   D+  G  + FS     K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++  G   +YK   CPS   + +  CN+
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDN--GEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKK-AGLPFSYKFHFCPSYPRTRLIPCNN 155          
BLAST of BQ623533 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.448e-12
Identity = 44/157 (28.03%), Postives = 75/157 (47.77%), Query Frame = 3
Query:   45 ADPLVDVNGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMYDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGGDRATYKIVHCPSVCESCVSLCNDGG 512
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP   +S    C+D G
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGS--LAYKLVFCP---KSSSGSCSDIG 151          
The following BLAST results are available for this feature:
BLAST of BQ623533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC2.225e-2739.4921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU2.719e-2536.16Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA3.332e-1535.48Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE3.448e-1228.03Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_00624 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00624 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623533 ID=BQ623533; Name=BQ623533; organism=Citrus sinensis; type=EST; length=614bp
CCTTCCTTGTCCTTACCTTTGCCACAAAACCGCTTGTGGGACTCGCTGAT
CCTTTGGTTGATGTCAATGGCAACAAGGTCGAAGCATCCCGAGACTACTA
TTTGGTCTCAGCAATTCGAGGAGCAGGCGGCGGCGGCCTCACCCTCTTCA
GGGGCAGAAACGAACTCTGCCCACTTGATGTTGTCCAACTAAGTTCCGAC
TCAGAAAGAGGAACCCGTTTAAGATTCTCAATGTATGATAAAACTAGTAT
TATCAATGAAGATGTGGATCTGAACGTGAGATTCTCGACAGAGACTCGCT
GCAACGAACCAACAGTATGGAGAGTCGACAGCTATGATCCATCGAGAGGA
AAATGGTTTATAACAACTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAAC
TTTGAAAAACTGGTTTAAGTTTGAGAGAATTGGAGGAGATCGAGCTACGT
ACAAGATTGTTCACTGTCCTTCCGTTTGCGAATCCTGTGTATCTTTATGC
AATGATGGTGGGGGTTTCTAACGATCATGCTCGACGTTTGGCTCTCACTA
ACGGGCGCGCGCTTGCTGTTGTTCTAGTCCCTGGTAATGAGAGATCAGCC
TATGTGCGTCTTGA
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