C21829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.098e-23 Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEKTHINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 5.098e-23 Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEKTHINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.098e-23 Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEKTHINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.937e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.937e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.937e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.304e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.304e-22 Identity = 48/58 (82.76%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEKTHIN+VVIGHVDSGKSTTTGH IYKLGGI KR I +FEKE+S M KG FKYAW Sbjct: 1 MGKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRTIEKFEKESSEMGKGSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.304e-22 Identity = 50/58 (86.21%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HINIVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58
BLAST of C21829 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 7.361e-22 Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = 3 Query: 78 MGKEKTHINIVVIGHVDSGKSTTTGHXIYKLGGIXKRVIXRFEKEASXMNKGXFKYAW 251 MGKEK HI+IVVIGHVDSGKSTTTGH IYKLGGI KRVI RFEKEA+ MNK FKYAW Sbjct: 1 MGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAW 58 The following BLAST results are available for this feature:
BLAST of C21829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >C21829 ID=C21829; Name=C21829; organism=Citrus sinensis; type=EST; length=259bpback to top |