C21835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.920e-39 Identity = 76/86 (88.37%), Postives = 78/86 (90.70%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKEENPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DN AD DI K +T Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDT 336
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.067e-37 Identity = 73/82 (89.02%), Postives = 75/82 (91.46%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXK 253 +ATLMNIADNPT VQLPGMYNKEENPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DN + DI K Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVK 332
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37 Identity = 71/86 (82.56%), Postives = 77/86 (89.53%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKE+NPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DN D DI K ++ Sbjct: 242 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDS 327
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37 Identity = 74/86 (86.05%), Postives = 76/86 (88.37%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKEENPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DN A DI K +T Sbjct: 251 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDT 336
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 3.899e-36 Identity = 71/86 (82.56%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIAD PT VQLPGMYNKEENPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DN D + + +T Sbjct: 238 NATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDT 323
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 6.650e-36 Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKEEN R PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D + DI K +T Sbjct: 253 NATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDT 338
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.134e-35 Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNK+EN R PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DN + + K +T Sbjct: 255 NATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDT 340
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.481e-35 Identity = 70/86 (81.40%), Postives = 74/86 (86.05%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKEENPR PIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFR D DI K +T Sbjct: 248 NATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDT 333
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 1.935e-35 Identity = 69/86 (80.23%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIADNPT VQLPGMYNKE+NPR PIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + + + +T Sbjct: 247 NATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDT 332
BLAST of C21835 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.935e-35 Identity = 68/86 (79.07%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 8 DATLMNIADNPTCVQLPGMYNKEENPRXPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRIDNXADXDIXKXXET 265 +ATLMNIAD PT VQLPGMYNK ENPR PI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DN +D + K +T Sbjct: 241 NATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDT 326 The following BLAST results are available for this feature:
BLAST of C21835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >C21835 ID=C21835; Name=C21835; organism=Citrus sinensis; type=EST; length=283bpback to top |