C21858

Overview
NameC21858
Unique NameC21858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length226
Libraries
Library NameType
Valencia orange young seeds cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.056e-28
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSN SRLSIATFQNPAPEATVYPLKIREGEK VLE PI F EMYRRKMSKDLELARLKKLA E+
Sbjct:  272 KNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLELARLKKLAKEQ 344          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.802e-28
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSNSSRLSIATFQNPAPEATVYPLK+REGEK ++EEPI F EMY+RKM +DLELARLKKLA E+
Sbjct:  270 KNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLELARLKKLAKEE 342          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.353e-28
Identity = 60/73 (82.19%), Postives = 67/73 (91.78%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSNSSRLSIATFQNPAP+ATVYPLK+REGEK +LEEPI F EMY+RKM +DLELARLKKLA E+
Sbjct:  271 KNADHQAVVNSNSSRLSIATFQNPAPDATVYPLKVREGEKAILEEPITFAEMYKRKMGRDLELARLKKLAKEE 343          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.242e-28
Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSNSSRLSIATFQNPAPEA VYPLKIREGEK +++EPI F EMYRRKMSKDLELARLKK A E+
Sbjct:  274 KNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQ 346          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.168e-27
Identity = 59/73 (80.82%), Postives = 66/73 (90.41%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSNSSR+SIATFQNPAP ATVYPLKIREGEK V+EEPI F EMY+RKMS+D+E+A LKKLA EK
Sbjct:  272 KNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKLAKEK 344          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.569e-27
Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNSNSSRLSIATFQNPA EA VYPL +REGEKP+LE PI + EMY++KMSKDLELARLKKLA E+
Sbjct:  272 KNADHQAVVNSNSSRLSIATFQNPAQEAIVYPLSVREGEKPILEAPITYTEMYKKKMSKDLELARLKKLAKEQ 344          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.408e-26
Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNS++SRLSIATFQNPAPEA VYPLKI EGEK ++EEP+ F EMY++KMS DLELARLKKLA +K
Sbjct:  269 KNADHQAVVNSSTSRLSIATFQNPAPEAIVYPLKINEGEKSIMEEPMTFMEMYKKKMSTDLELARLKKLAKDK 341          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.592e-24
Identity = 52/73 (71.23%), Postives = 63/73 (86.30%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVNS  SRLSIATFQNP+P+ATVYPL IREGE  ++EEPI F ++YRRKM+KDLE+AR K+LA E+
Sbjct:  272 KNADHQAVVNSECSRLSIATFQNPSPDATVYPLAIREGENSIMEEPITFADLYRRKMAKDLEIARHKRLAKEE 344          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.336e-23
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 2
Query:    8 ENAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            +NA HQAVVN  SSRLSIATFQNPAP+A V+PL +REGE+P+LEEPI F EMYRRKM +DL+LA+ KK A ++
Sbjct:  274 KNADHQAVVNGESSRLSIATFQNPAPDARVWPLAVREGEEPILEEPITFTEMYRRKMERDLDLAKRKKQAKDQ 346          
BLAST of C21858 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.752e-21
Identity = 50/72 (69.44%), Postives = 58/72 (80.56%), Query Frame = 2
Query:   11 NAXHQAVVNSNSSRLSIATFQNPAPEATVYPLKIREGEKPVLEEPIPFXEMYRRKMSKDLELARLKKLANEK 226
            NA HQAVVNS SSRLSIATFQNPA  A VYPLKIREGEK +L+E I + EMY++ M+K +E+A  KKLA EK
Sbjct:  273 NADHQAVVNSTSSRLSIATFQNPAQNAIVYPLKIREGEKAILDEAITYAEMYKKCMTKHIEVATRKKLAKEK 344          
The following BLAST results are available for this feature:
BLAST of C21858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
FL3H_VITVI1.056e-2887.67Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_MATIN1.802e-2882.19Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH2.353e-2882.19Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_PETHY5.242e-2883.56Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_PETCR1.168e-2780.82Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_MALDO7.569e-2779.45Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FL3H_CALCH6.408e-2676.71Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_DIACA4.592e-2471.23Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FL3H_HORVU1.336e-2369.86Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FNSI_PETCR4.752e-2169.44Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
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Properties
Property NameValue
Genbank descriptionC21858 Valencia orange young seeds cDNA Citrus sinensis cDNA clone corVSSH-17R 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>C21858 ID=C21858; Name=C21858; organism=Citrus sinensis; type=EST; length=226bp
GGCACGAGAGAACGCGGNTCACCAAGCAGTGGTGAACTCAAACAGCAGCA
GATTATCGATTGCTACATTCCAAAACCCAGCACCAGAGGCAACAGTGTAT
CCACTCAAGATAAGAGAGGGAGAGAAGCCTGTACTGGAGGAACCAATTCC
ATTTTNTGAGATGTACAGGAGGAAGATGAGCAAAGACCTTGAACTCGCCA
GGCTTAAGAAGCTGGCCAACGAGAAG
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