CB290206

Overview
NameCB290206
Unique NameCB290206
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig124 contig Csv1_Contig124:1..800. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 459.144 bits (1180), Expect = 1.244e-128
Identity = 216/264 (81.82%), Postives = 233/264 (88.26%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKPAA 800
            VFP+GVLE LR MCCFRFKLWWMTQRMG+CGKD+PLETQFML+ESKD  E + DD PT+YTVFLPLLEGQFR+ LQGNE NEIEIC ESGD AVET+QG +LVY HAG NPFEVI Q+VKAVE++MQTF HREKKK PSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLS GGTPPKFLIIDDGWQQIENK K+E NC+VQEGAQFA+RL GIKEN+KFQK  Q   QVSGLK VVD +KQ HNVK VY WHALAGYWGGVKPAA
Sbjct:   57 VFPIGVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKDEVEGNGDDAPTVYTVFLPLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVERHMQTFHHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQQIENKEKDE-NCVVQEGAQFATRLVGIKENAKFQKSDQKDTQVSGLKSVVDNAKQRHNVKQVYAWHALAGYWGGVKPAA 319          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 4.327e-89
Identity = 157/267 (58.80%), Postives = 199/267 (74.53%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQI-ENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS----GLKHVVDESKQNHNVKYVYVWHALAGYWGGVKP 794
            VF +G LEDLR MC FRFKLWWMTQRMGT GK++P ETQF++VE+   S+    D  + Y VFLP+LEG FR+ LQGNE NE+EICLESGD  V+  +G +LV+  AG +PF+VI++AVKAVE+++QTF+HRE+KK P  L+WFGWCTWDAFYT+VTA+ V +GL+SL AGG  PKF+IIDDGWQ +  ++   E N      A FA+RLT IKEN KFQK  +   +V      L HV+ + K N+++KYVYVWHA+ GYWGGVKP
Sbjct:   57 VFSLGKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGSDLGGRDQSSSYVVFLPILEGDFRAVLQGNEANELEICLESGDPTVDQFEGSHLVFVAAGSDPFDVITKAVKAVEQHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAKDVKQGLESLKAGGVTPKFVIIDDGWQSVGMDETSVEFN--ADNAANFANRLTHIKENHKFQKDGKEGHRVDDPSLSLGHVITDIKSNNSLKYVYVWHAITGYWGGVKP 321          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 1.032e-82
Identity = 146/268 (54.48%), Postives = 191/268 (71.27%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNS--ESDQDDG----PTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKP 794
            + P+G L + R M CFRFKLWWM QRMG  G+D+P ETQF+LVES D S  ESD  +G      +YTVFLPL+EG FRS LQGN N+E+E+CLESGD   + +   + +Y HAG +PF+ I+ A++ V+ ++ +F  R +KK P  +D+FGWCTWDAFY +VT EGV+ GLKSL+AGGTPPKF+IIDDGWQ +E     E+    +E   F  RLTGIKEN KF+KK    +   G+K++V  +K+ H +KYVYVWHA+ GYWGGV+P
Sbjct:   57 IVPIGTLRNSRFMSCFRFKLWWMAQRMGEMGRDIPYETQFLLVESNDGSHLESDGANGVECNQKVYTVFLPLIEGSFRSCLQGNVNDEVELCLESGDVDTKRSSFTHSLYIHAGTDPFQTITDAIRTVKLHLNSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQSVERDATVEAGDEKKESPIF--RLTGIKENEKFKKK---DDPNVGIKNIVKIAKEKHGLKYVYVWHAITGYWGGVRP 319          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.405e-55
Identity = 108/269 (40.15%), Postives = 157/269 (58.36%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKP---KEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVS-GLKHVVDESKQNHN-VKYVYVWHALAGYWGGVKPAA 800
            V  +G L+++R M  FRFK+WW T  +G+ G+D+  ETQ ++++   +           Y + LPLLEG FRS+ Q  E++++ +C+ESG   V  ++   +VY HAG +PF+++  A+K +  +M TF   E+K  P  +D FGWCTWDAFY  V  +GV +G+K L  GG PP  ++IDDGWQ I +       E   I   G Q   RL   +EN KF+      +Q   G+K  V + K   + V Y+YVWHAL GYWGG++P A
Sbjct:   81 VASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILDQSGSDSGPGSGSGRPYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAGDDPFKLVKDAMKVIRVHMNTFKLLEEKSPPGIVDKFGWCTWDAFYLTVNPDGVHKGVKCLVDGGCPPGLVLIDDGWQSIGHDSDGIDVEGMNITVAGEQMPCRLLKFEENHKFKDYVSPKDQNDVGMKAFVRDLKDEFSTVDYIYVWHALCGYWGGLRPEA 349          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.099e-51
Identity = 112/271 (41.33%), Postives = 152/271 (56.09%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQ-GNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIENKPKE-----ESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKHVVDESKQNH-NVKYVYVWHALAGYWGGVKPAA 800
            V P+G L D R M  FRFK+WW T  +GT G+DV  ETQ M+++      S    GP  Y + LP++EG FR+ L+ G   + + + LESG + V  +     VY HAG +PF+++  A++ V  ++ TF   E+K  P  +D FGWCTWDAFY  V  EGV EG++ L+ GG PP  ++IDDGWQ I +   +     E       G Q   RL   +EN KF+      E   G+   V E K     V+ VYVWHAL GYWGG++P A
Sbjct:   85 VVPIGKLRDTRFMSIFRFKVWWTTHWVGTNGRDVENETQMMILDQSGTKSSPT--GPRPYVLLLPIVEGPFRACLESGKAEDYVHMVLESGSSTVRGSVFRSAVYLHAGDDPFDLVKDAMRVVRAHLGTFRLMEEKTPPPIVDKFGWCTWDAFYLKVHPEGVWEGVRRLADGGCPPGLVLIDDGWQSICHDDDDLGSGAEGMNRTSAGEQMPCRLIKFQENYKFR------EYKGGMGGFVREMKAAFPTVEQVYVWHALCGYWGGLRPGA 347          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.988e-47
Identity = 101/269 (37.55%), Postives = 155/269 (57.62%), Query Frame = 3
Query:    9 VFPMGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQI---ENKPKEESNCI--VQEGAQFASRLTGIKENSKFQ--KKCQNSEQVSGLKHVVDESKQNHNVKYVYVWHALAGYWGGVKP 794
            V P+G L+ ++    FRFK+WW T  +GT G ++  ETQ ++++   +           Y + LP+LE  FR++LQ   N+ +++ +ESG   V  +     +Y H   +P+ ++ +AVK ++  + TF   E+K  PS ++ FGWCTWDAFY  V  +GV EG+K+L+ GG PP F+IIDDGWQ I   ++ P  E + +     G Q   RL   +EN KF+  +   N  +   +  V D  ++  +V+ VYVWHAL GYWGGV+P
Sbjct:   99 VVPLGKLKGIKFTSIFRFKVWWTTHWVGTNGHELQHETQILILDKNISLGRP-------YVLLLPILENSFRTSLQPGLNDYVDMSVESGSTHVTGSTFKACLYLHLSNDPYRLVKEAVKVIQTKLGTFKTLEEKTPPSIIEKFGWCTWDAFYLKVHPKGVWEGVKALTDGGCPPGFVIIDDGWQSISHDDDDPVTERDGMNRTSAGEQMPCRLIKYEENYKFREYENGDNGGKKGLVGFVRDLKEEFRSVESVYVWHALCGYWGGVRP 360          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.929e-38
Identity = 80/208 (38.46%), Postives = 116/208 (55.77%), Query Frame = 3
Query:   54 FRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIE---NKPKEESNCIVQEGAQFASRLTGIKENSKFQK 668
            FRFK WW TQ +G  G D+ +ETQ++L+E  +            Y V +P++E  FRSAL    N+ ++I  ESG   V+ +    + Y H   NP++++ +A  A+  ++ +F   E+K  P+ +D FGWCTWDAFY  V   G+  GL   S GG  P+F+IIDDGWQ I      P E++  +V  G Q + RL    E  KF+K
Sbjct:  102 FRFKTWWSTQWIGKSGSDLQMETQWILIEVPETKS---------YVVIIPIIEKCFRSALFPGFNDHVKIIAESGSTKVKESTFNSIAYVHFSENPYDLMKEAYSAIRVHLNSFRLLEEKTIPNLVDKFGWCTWDAFYLTVNPIGIFHGLDDFSKGGVEPRFVIIDDGWQSISFDGYDPNEDAKNLVLGGEQMSGRLHRFDECYKFRK 300          
BLAST of CB290206 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 6.556e-37
Identity = 82/233 (35.19%), Postives = 120/233 (51.50%), Query Frame = 3
Query:   18 MGVLEDLRPMCCFRFKLWWMTQRMGTCGKDVPLETQFMLVESKDNSESDQDDGPTIYTVFLPLLEGQFRSALQGNENNEIEICLESGDNAVETNQGLYLVYTHAGPNPFEVISQAVKAVEKYMQTFTHREKKKFPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSAGGTPPKFLIIDDGWQQIE---NKPKEESNCIVQEGAQFASRLTGIKENSKFQKKCQNSEQVSGLKH 707
            +G  ED   +  FRFK+WW T  +G  G D+  ETQ+++++  +            Y   +P +EG FR++L   E   + IC ESG   V+ +    + Y H   NP+ ++ +A  A+  +M TF   E+KK P  +D FGWCTWDA Y  V    +  G+K    GG  PKF+IIDDGWQ I    ++  +++  +V  G Q  +RLT  KE  KF+     S   S   H
Sbjct:  104 LGRFEDREFLSLFRFKMWWSTAWIGKSGSDLQAETQWVMLKIPEIDS---------YVAIIPTIEGAFRASLTPGEKGNVLICAESGSTKVKESSFKSIAYIHICDNPYNLMKEAFSALRVHMNTFKLLEEKKLPKIVDKFGWCTWDACYLTVDPATIWTGVKEFEDGGVCPKFVIIDDGWQSINFDGDELDKDAENLVLGGEQMTARLTSFKECKKFRNYKGGSFITSDASH 327          
The following BLAST results are available for this feature:
BLAST of CB290206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS2_ARATH1.244e-12881.82Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH4.327e-8958.80Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH1.032e-8254.48Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH1.405e-5540.15Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ2.099e-5141.33Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA6.988e-4737.55Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
STSYN_PEA5.929e-3838.46Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH6.556e-3735.19Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290206 ID=CB290206; Name=CB290206; organism=Citrus sinensis; type=EST; length=800bp
GCCCTTGGGTCTTCCCCATGGGTGTCTTAGAGGATCTCCGGCCTATGTGT
TGCTTCCGATTTAAGTTATGGTGGATGACCCAGAGGATGGGTACATGCGG
AAAAGATGTACCACTGGAGACTCAATTCATGCTTGTGGAGAGCAAGGATA
ACTCTGAAAGTGATCAGGATGACGGCCCAACTATCTACACTGTATTCCTT
CCTCTCCTTGAAGGCCAGTTCCGTTCCGCGCTGCAAGGCAATGAAAACAA
TGAGATAGAGATCTGCCTTGAGAGTGGAGATAATGCTGTTGAAACCAACC
AAGGACTTTACCTTGTCTACACACACGCTGGGCCTAATCCTTTTGAAGTA
ATCAGCCAAGCTGTGAAGGCTGTAGAAAAATACATGCAAACTTTCACTCA
TCGAGAGAAGAAGAAGTTTCCTTCTTTTCTTGACTGGTTTGGCTGGTGCA
CCTGGGATGCTTTCTACACTGATGTCACAGCTGAGGGTGTTGATGAAGGT
CTTAAAAGTCTGTCAGCTGGAGGGACTCCTCCAAAATTTCTTATCATAGA
TGATGGTTGGCAACAGATTGAAAATAAACCTAAAGAGGAAAGTAATTGCA
TTGTACAAGAAGGAGCACAGTTTGCAAGCAGGCTCACTGGAATCAAAGAG
AATTCAAAATTCCAAAAGAAGTGCCAGAATAGTGAGCAGGTCTCAGGCCT
CAAGCACGTTGTAGATGAATCCAAGCAGAATCACAATGTGAAGTATGTGT
ATGTATGGCATGCTTTAGCTGGTTACTGGGGCGGAGTAAAACCTGCTGCT
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