CB290214
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290214 vs. ExPASy Swiss-Prot
Match: ALKB_ECOLI (Alpha-ketoglutarate-dependent dioxygenase alkB OS=Escherichia coli (strain K12) GN=alkB PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.615e-14 Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = 2 Query: 338 YGNIRPTDGDVPPIIPAEFHQLVGKAIQDSRALIEKISTGRKDIEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 742 Y I P P +P FH L +A A P PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G L+ K+++LE GDV+++GG+SR +HG++ + Sbjct: 78 YSPIDPQTNKPWPAMPQSFHNLCQRAAT----------------AAGYPDFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPL 192
BLAST of CB290214 vs. ExPASy Swiss-Prot
Match: ALKB_SALTY (Alpha-ketoglutarate-dependent dioxygenase alkB OS=Salmonella typhimurium GN=alkB PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 6.208e-13 Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 467 IEAELPCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKI 742 I A PD C+ N Y+ KL LHQDKDE D P+VS S+G A F +G LR ++++LE GD++++GG+SR +HG++ + Sbjct: 105 IAAGYASFQPDACLINRYAPGAKLSLHQDKDEP----DLRAPIVSVSLGVPAVFQFGGLRRSDPIQRILLEHGDIVVWGGESRLFYHGIQPL 192
BLAST of CB290214 vs. ExPASy Swiss-Prot
Match: ALKB_CAUCR (Alpha-ketoglutarate-dependent dioxygenase alkB homolog OS=Caulobacter crescentus GN=alkB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 482 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTA 757 P PD C+ N Y ++GLHQD+DE+ D PV+S S+GD+A F G + + + L SGDV G +R FHGV++I P ++ Sbjct: 114 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSS 201
BLAST of CB290214 vs. ExPASy Swiss-Prot
Match: ALKB_CAUCN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=alkB PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 36/92 (39.13%), Postives = 52/92 (56.52%), Query Frame = 2 Query: 482 PCMSPDICIANFYSATGKLGLHQDKDESQESIDKCLPVVSFSIGDSAEFLYGDLRDVANAKKVILESGDVLIFGGKSRRIFHGVEKIFPDTA 757 P PD C+ N Y ++GLHQD+DE+ D PV+S S+GD+A F G + + + L SGDV G +R FHGV++I P ++ Sbjct: 114 PETPPDSCLVNLYRDGARMGLHQDRDEA----DPRFPVLSISLGDTAVFRIGGVNRKDPTRSLRLASGDVCRLLGPARLAFHGVDRILPGSS 201 The following BLAST results are available for this feature:
BLAST of CB290214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290214 ID=CB290214; Name=CB290214; organism=Citrus sinensis; type=EST; length=773bpback to top |