CB304400
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304400 vs. ExPASy Swiss-Prot
Match: SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana GN=SYP52 PE=1 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 2.013e-72 Identity = 139/196 (70.92%), Postives = 161/196 (82.14%), Query Frame = -2 Query: 73 ESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDERLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCMXXXXXXXXXXXXXIYMLIKYL 660 ++QR ASAIRRKITILGTRLDSLQSLL K+PGKQ +SEKEMNRRKDM+ NLRSK NQ+AS LNMSNFANRDSL G ++K D +NR +G+DNQG+V FQRQ+MREQDE LEKLEETV+STKHIALAVNEEL L TRLIDDLD VD+TDSRLRRVQK+LA++NK K GC+CM M I++L+KYL Sbjct: 38 DAQRRASAIRRKITILGTRLDSLQSLLVKVPGKQHVSEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIVVFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL 233
BLAST of CB304400 vs. ExPASy Swiss-Prot
Match: SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana GN=SYP51 PE=1 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 7.650e-72 Identity = 138/196 (70.41%), Postives = 163/196 (83.16%), Query Frame = -2 Query: 73 ESQRHASAIRRKITILGTRLDSLQSLLSKLPGKQPISEKEMNRRKDMLANLRSKVNQMASTLNMSNFANRDSLLGPEIKSADVMNRATGLDNQGLVGFQRQIMREQDERLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCMXXXXXXXXXXXXXIYMLIKYL 660 ++QR ASAIRRKITI G +LDSLQSLL+++ GK PISEKEMNRRKDM+ NLRSK NQMA+ LNMSNFANRDSLLGP+IK D M+R TG+DNQG+VG+QRQ+MREQDE LE+LE TV+STKHIALAV+EELDL TRLIDDLD HVDVTDSRLRRVQK+LA++NK + GC+CM M I+ML+KY+ Sbjct: 38 DAQRRASAIRRKITIFGNKLDSLQSLLAEIHGK-PISEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIVGYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQKSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKYM 232
BLAST of CB304400 vs. ExPASy Swiss-Prot
Match: STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum GN=syn8B PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.501e-14 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = -2 Query: 136 ISEKEMNRRKDMLANLRSKVNQMASTLN--MSNFANRDSLLGPEIK-SADVMNRATG----------LDNQGLVGFQRQIMREQDERLEKLEETVVSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAILNKRTKGGCTCMCM 555 I EKE+ RRK+ + +L S NQ+ STL+ ++N + ++ L+G NR G DNQ L Q+ IMREQDE L+ L ++++ K++A A++ ELD H ++DD++ D RLR + + + + C +C+ Sbjct: 71 IQEKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKETEATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIGTDAVSMRLRNANRRMETIKQNAGSTCMIVCI 223 The following BLAST results are available for this feature:
BLAST of CB304400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304400 ID=CB304400; Name=CB304400; organism=Citrus sinensis; type=EST; length=661bpback to top |