CB304455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 5.806e-28 Identity = 57/90 (63.33%), Postives = 78/90 (86.67%), Query Frame = -1 Query: 266 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSALP 535 VS GVTG RA+++ V++L++E+K+ T KPVAVGFGISKPEHV+Q+A WGADGVI+GSAMV+ LGEA SP++GL+ LE++A+ +K+ALP Sbjct: 258 VSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRLEEYARGMKNALP 347
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.030e-21 Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = -1 Query: 257 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSALP*EQ 535 VS GVTG R+ ++ V+ LL ++ +T KP+ VGFGISKPEH QV WGAD VIVGSAMVK L E +PEEGLK + F + LK AL +Q Sbjct: 176 VSVTGVTGMRSQVTSRVKELLTSLRSATDKPIGVGFGISKPEHALQVKNWGADAVIVGSAMVKRLAEG-TPEEGLKAIGAFCQDLKQALKEDQ 267
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.612e-20 Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG R+ + G V LL E+++ T KP+ VGFGIS+PEH +QV WGAD IVGSA VK L E +PE+GL + F +SLK+AL Sbjct: 176 VSTTGVTGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRLAEG-TPEQGLAAIADFCRSLKTAL 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_SYNY3 (Tryptophan synthase alpha chain OS=Synechocystis sp. (strain PCC 6803) GN=trpA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.693e-19 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R + V+ LL +++ T KP+ VGFGIS+PE +QV WGAD VIVGSAMVK L E +P EGL+ LE F + LK+A+ Sbjct: 176 VSVTGVTGVRTEVGSRVEALLAGMRQVTDKPIGVGFGISQPEQAEQVKAWGADAVIVGSAMVKRLAEG-TPTEGLQALETFCRELKTAI 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_MICAN (Tryptophan synthase alpha chain OS=Microcystis aeruginosa (strain NIES-843) GN=trpA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.772e-19 Identity = 50/89 (56.18%), Postives = 60/89 (67.42%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R ++ V+ LL I+ T KPV VGFGIS+P QV WGAD VIVGSAMVK L + SP +GLK LE+F +SLK A+ Sbjct: 176 VSVTGVTGMRKQVATRVEELLDSIRSVTDKPVGVGFGISEPTQALQVKNWGADAVIVGSAMVKRLAD-NSPSDGLKSLEEFCRSLKQAI 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_TRIEI (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19 Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG RA + V+ LL +++E T KP+ VGFGIS+PE QV WG+D VIVGSA+VK L E SP+EGLK + +F ++LK+A+ Sbjct: 177 VSVTGVTGMRAQMQTRVEDLLAQMREVTDKPIGVGFGISQPEQALQVKKWGSDAVIVGSAVVKRLAEG-SPDEGLKAIGEFCQNLKAAI 264
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_CYAA5 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain ATCC 51142) GN=trpA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.434e-19 Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS GVTG R ++ V+ LL+ ++ +T KP+ VGFGIS+PEH QV WG+D VIVGSA VK L + +PEEGLK + +F + LK A+ Sbjct: 176 VSVTGVTGMRTQVATRVEDLLKSLRNTTDKPIGVGFGISEPEHALQVKNWGSDAVIVGSACVKRLAQG-TPEEGLKAVGEFCQRLKQAI 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_GLOVI (Tryptophan synthase alpha chain OS=Gloeobacter violaceus GN=trpA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.872e-18 Identity = 49/88 (55.68%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 272 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSA 535 VS+ GVTGAR ++ V+T L +++ TT+PVAVGFGIS PE +VA GADGVIVGSA V+LL A +PEE L +L +F + LK A Sbjct: 182 VSTTGVTGARTQVASSVRTSLAQLRALTTRPVAVGFGISTPEQAHEVASLGADGVIVGSACVQLLATA-APEERLGQLAEFCRQLKKA 268
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.872e-18 Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG R + VQ L+ ++++ T KP+ VGFGIS+ EH +QV WGAD IVGSA V L E SP +GL + F +SLKS+L Sbjct: 176 VSTTGVTGMRTKVENRVQDLIADLRQVTDKPIGVGFGISRTEHARQVMDWGADAAIVGSAFVNRLSEG-SPSQGLSAISTFCRSLKSSL 263
BLAST of CB304455 vs. ExPASy Swiss-Prot
Match: TRPA_THEEB (Tryptophan synthase alpha chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.171e-18 Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = -1 Query: 269 VSSIGVTGARASISGHVQTLLREIKESTTKPVAVGFGISKPEHVQQVAGWGADGVIVGSAMVKLLGEAQSPEEGLKELEKFAKSLKSAL 535 VS+ GVTG R ++ VQ LL +++ T KP+ VGFGI+ PEH +QV WGAD IVGSA VK L E P++GL + +F +SL++AL Sbjct: 178 VSTTGVTGMRQEMASRVQELLHTLRQITPKPIGVGFGIASPEHARQVRDWGADAAIVGSAFVKRLAE---PDQGLAAVAEFCQSLRTAL 263 The following BLAST results are available for this feature:
BLAST of CB304455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304455 ID=CB304455; Name=CB304455; organism=Citrus sinensis; type=EST; length=535bpback to top |