CB304463
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304463 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 6.773e-46 Identity = 91/120 (75.83%), Postives = 100/120 (83.33%), Query Frame = -2 Query: 200 LRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVIS-----VTENG-EGNESNRLMRYAAMFMSIRPHDHLE 541 LRRPF+DRLP SSATF C+E+IEAF L +++LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQ AWRR R RTRG I V+EN EGN RL++YAAMFMSIRPHDHLE Sbjct: 607 LRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIGGSMSPVSENSIEGNSERRLLQYAAMFMSIRPHDHLE 726
BLAST of CB304463 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 5.391e-27 Identity = 59/120 (49.17%), Postives = 81/120 (67.50%), Query Frame = -2 Query: 212 LRRPFIDRLPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYR----------MRTRGPVISVTENGEGNESNRLMRYAAMFMSIRPH 541 LRRPF++RLP SS+T +E+ EAFGLDA++++Y+T HFRY F NE++KR+ARYYS WRTWAAV +Q AWRRY+ +R R P+ GE ++L YAA+ S +P+ Sbjct: 572 LRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLGE----DKLRLYAAILTSPKPN 687
BLAST of CB304463 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.598e-13 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = -2 Query: 236 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNESNRLMRYAA 517 LP+S+ T +E +EAF L A +L+++ + FR + +++L+ T RYYS WRTWAA +Q AWRRY+ + +S+ E+ + + AA Sbjct: 567 LPSSTRTVRALEEVEAFALQAGDLKFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLSLAESFSSYDEEEAVAVAA 659
BLAST of CB304463 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = -2 Query: 263 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGEGNE 517 LP+S+ T + +EAF L A++L+++ + FR + +++L+ T R+YS +WRTWAA IQ AWRRY+ R ++ E+ E E Sbjct: 567 LPSSTRTVRALVEVEAFALRAEDLKFVANQFR-RLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEE 650
BLAST of CB304463 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.175e-11 Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = -2 Query: 272 LPASSATFFCMESIEAFGLDAKNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRMRTRGPVISVTENGE 517 LP+S+ T + +EAF L+A+ L+++ FR + + ++++T R+YS WRTWA+ IQ AWRRY R + + E E Sbjct: 588 LPSSTRTVKALTEVEAFALEAEELKFVASQFR-RLHSRQVQQTFRFYSQQWRTWASCFIQAAWRRYSRRKNAELRRIEEKEE 668 The following BLAST results are available for this feature:
BLAST of CB304463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CB304463 ID=CB304463; Name=CB304463; organism=Citrus sinensis; type=EST; length=560bpback to top |