CB304471

Overview
NameCB304471
Unique NameCB304471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length403
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1580 contig Csv1_Contig1580:824..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304471 vs. ExPASy Swiss-Prot
Match: ANXD2_ARATH (Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.742e-21
Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = -1
Query:  227 GTDEWGLTRVVTTRAEVDMQRIKEEYHRRNTVTLEKAIAGDTFGDYERMLLALIGHGDA 403
            GTDEWGLTRVVTTR EVDM+RIKEEY RRN++ L++AIA DT GDYE ML+AL+GHGDA
Sbjct:  259 GTDEWGLTRVVTTRTEVDMERIKEEYQRRNSIPLDRAIAKDTSGDYEDMLVALLGHGDA 317          
BLAST of CB304471 vs. ExPASy Swiss-Prot
Match: ANXD7_ARATH (Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.438e-19
Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = -1
Query:  227 GTDEWGLTRVVTTRAEVDMQRIKEEYHRRNTVTLEKAIAGDTFGDYERMLLALIGHGDA 403
            GTDEWGLTRVVTTRAE DM+RIKEEY RRN+V L++AIA DT GDYE +LLAL+GH  A
Sbjct:  258 GTDEWGLTRVVTTRAEFDMERIKEEYIRRNSVPLDRAIAKDTHGDYEDILLALLGHDHA 316          
BLAST of CB304471 vs. ExPASy Swiss-Prot
Match: ANXD6_ARATH (Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.887e-19
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = -1
Query:  227 GTDEWGLTRVVTTRAEVDMQRIKEEYHRRNTVTLEKAIAGDTFGDYERMLLALIGHGDA 403
            GTDEW LTRVVTTRAEVD++RIKEEY RRN+V L++AIA DT GDY+ MLLAL+GH  A
Sbjct:  260 GTDEWALTRVVTTRAEVDLERIKEEYLRRNSVPLDRAIANDTSGDYKDMLLALLGHDHA 318          
BLAST of CB304471 vs. ExPASy Swiss-Prot
Match: ANXD1_ARATH (Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.023e-15
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = -1
Query:  227 GTDEWGLTRVVTTRAEVDMQRIKEEYHRRNTVTLEKAIAGDTFGDYERMLLALIGHGDA 403
            GTDE  LTR+VTTRAE+D++ I EEY RRN++ LEKAI  DT GDYE+ML+AL+G  DA
Sbjct:  259 GTDEGALTRIVTTRAEIDLKVIGEEYQRRNSIPLEKAITKDTRGDYEKMLVALLGEDDA 317          
BLAST of CB304471 vs. ExPASy Swiss-Prot
Match: ANX4_FRAAN (Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 8.963e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = -1
Query:  230 GTDEWGLTRVVTTRAEVDMQRIKEEYHRRNTVTLEKAIAGDTFGDYERMLLALIGHGD 403
            GTDE  LTRV+ TRAE D++ IKE Y+++N+V LE+A+A DT GDY+  LL L+G  D
Sbjct:  257 GTDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKAFLLTLLGKED 314          
The following BLAST results are available for this feature:
BLAST of CB304471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ANXD2_ARATH4.742e-2177.97Annexin D2 OS=Arabidopsis thaliana GN=ANN2 PE=2 SV... [more]
ANXD7_ARATH4.438e-1976.27Annexin D7 OS=Arabidopsis thaliana GN=ANNAT7 PE=2 ... [more]
ANXD6_ARATH9.887e-1974.58Annexin D6 OS=Arabidopsis thaliana GN=ANN6 PE=2 SV... [more]
ANXD1_ARATH1.023e-1566.10Annexin D1 OS=Arabidopsis thaliana GN=ANN1 PE=1 SV... [more]
ANX4_FRAAN8.963e-1256.90Annexin-like protein RJ4 OS=Fragaria ananassa PE=2... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304471 ID=CB304471; Name=CB304471; organism=Citrus sinensis; type=EST; length=403bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTGCAGGAACACTTTTTAA
CACCTTATTCATAACAAACATCTCTTAAAATCTCTTAAAAAACAGGCAAG
AGTGCATAAACATGGAACATGCTACACACAGGATGAGCATATAAAGTAAG
TTTTAAACAAACGATAACCAAACCATAAACTGTTTTCATATGAAAAAAAA
CTCTACTGATACAAAAGCATTGCTCAAGCATCTCCATGTCCAATCAAAGC
AAGAAGCATTCTCTCATAGTCTCCAAAAGTGTCGCCAGCAATTGCCTTTT
CCAAAGTGACAGTGTTGCGTCTATGGTATTCCTCCTTGATACGTTGCATA
TCCACCTCAGCACGAGTGGTGACGACTCTAGTAAGACCCCATTCGTCTGT
CCC
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