CB304568

Overview
NameCB304568
Unique NameCB304568
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2265 contig Csv1_Contig2265:578..1307. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.566e-50
Identity = 97/202 (48.02%), Postives = 138/202 (68.32%), Query Frame = -2
Query:  108 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSP--SERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 707
            P  +++P  C +  +E++  V +LG+LLF +L E LGL T+ LK+       +++GHYYP CPQPDLT+G+T H+D   LTILLQD  GGLQ+ H + WVDV PVPGALV+N+GD+LQ+++ND++ISVEHRVLAN +  PRIS+A FFS        +YGP  E++S E P  +R  T T+Y   + +K  DG + + Y ++
Sbjct:  165 PRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVA-GPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.208e-47
Identity = 97/207 (46.86%), Postives = 140/207 (67.63%), Query Frame = -2
Query:  108 EPELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDS------LYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 710
            +P+ +E P++CR   ++++++V+ LG +LF +L E LGLK + L+E    EG +++GHYYP CPQP+LT G + H+D G LTIL+QD  GGLQI    +W+DV  +PGALVINI D+LQ+++ND++ SVEHRVLAN    PRIS+AV F    +        LYGP  ELIS E P  +++ T  D+IT  F K+ D  + ++ +RL
Sbjct:  194 QPDPQEFPDVCRDILMKYSNYVRNLGLILFELLSEALGLKPNHLEEMDCAEGLILLGHYYPACPQPELTFGTSKHSDSGFLTILMQDQIGGLQILLENQWIDVPFIPGALVINIADLLQLITNDKFKSVEHRVLAN-KVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFAKRFDDSSSLSPFRL 399          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.590e-47
Identity = 90/202 (44.55%), Postives = 136/202 (67.33%), Query Frame = -2
Query:  108 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDS--LYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 707
            P+ +++PEICR   +E++  V  LG+ LF +L E LGL+ + L +    +G +M+ HYYP CP+PDLT+G + H+D   LT+LL D   GLQ++    W DV  V GAL+INIGD+LQ+++ND++IS+EHRVLAN +   R+S+A FF+   R +  +YGP  EL+S E P ++R+ T  DY T F  K LDG + + ++++
Sbjct:  168 PKPQDLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLPDQIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEENPPKYRETTIKDYATYFNAKGLDGTSALLHFKI 369          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.328e-45
Identity = 93/195 (47.69%), Postives = 129/195 (66.15%), Query Frame = -2
Query:  135 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFF----SPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDG 707
            PE +++PEICR   +E++  V  LGE LF +L E LGL  + LK+   L+G  M+ HY+P CP+PDLT G + H+D   LT+LL D+  GLQ+     W DV  VPGAL+INIGD+LQ+++ND++IS++HRVLAN +   R+S+A FF     P+ R  +YGP  EL+S E P ++R+ T  DY T F  K L G
Sbjct:  168 PEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACFFHTHVKPNPR--VYGPIKELVSEENPPKYRETTIRDYATYFNGKGLGG 360          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.637e-44
Identity = 91/202 (45.05%), Postives = 128/202 (63.37%), Query Frame = -2
Query:  108 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFF--SPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 707
            P L+E P  C +  ++++  VK+LG  L  +L EGLGL    LK+           +YYP CPQP+LT+G   HTD G +TILLQDD GGLQ+ H   WVDV P PG+LV+NIGD LQ++SND+Y+SVEHR ++N+    R+SI  FF  SP +   LYGP  EL+S + P ++R  T  D+ +    + LDG + ++ Y++
Sbjct:  163 PSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQHTDIGFVTILLQDDMGGLQVLHQNHWVDVPPTPGSLVVNIGDFLQLLSNDKYLSVEHRAISNNVGS-RMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSRYKI 363          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.807e-42
Identity = 85/205 (41.46%), Postives = 132/205 (64.39%), Query Frame = -2
Query:  108 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFF-----SPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 707
            P+ +++PE+C +  +E++  V +L EL+F +L E LGL  + LKE    +G  M+ H +P CP+P+ T G   HTD   LTILL D+ GGLQ+ +   W+DV P P AL+ N+GD LQ++SND+++S+EHR+LAN   EPRIS+A FF     SPS R  +YGP  EL+S   P ++R  T ++    +  ++ +G + +++ R+
Sbjct:  158 PKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSR--VYGPIKELLSELNPPKYRD-TTSESSNHYVARKPNGNSSLDHLRI 359          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.659e-30
Identity = 74/189 (39.15%), Postives = 108/189 (57.14%), Query Frame = -2
Query:  147 PELKEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGR--MMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTK 707
            PE +EV E       E+  HVK+L E L G+L +GLGLK D LKE    E    MM  +YYP CP+PDL +G+ +HTD   +T+L+ ++  GLQ+   + W D + +P A++++IGD +  +SN  Y +V HR   +   + R+S  VF  P  R+ + GP PEL   + P +F+ F   DY  R   K
Sbjct:  153 PEYREVNE-------EYAVHVKKLSETLLGILSDGLGLKRDALKEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVPNEVPGLQVFKDDHWFDAEYIPSAVIVHIGDQILRLSNGRYKNVLHRTTVDKE-KTRMSWPVFLEP-PREKIVGPLPELTGDDNPPKFKPFAFKDYSYRKLNK 332          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.136e-29
Identity = 74/180 (41.11%), Postives = 106/180 (58.89%), Query Frame = -2
Query:  132 VKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVG---HYYPYCPQPDLTVGITSHTDPGPLTILLQDDK-GGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELI----SPEKPARFRQFTHTDYITRFFTKQLDGK 647
            +++L E L  +LCE LGL+   LK+  +   R   G     YP CP PDL  G+ +HTD G + +L QDDK  GLQ+    EWVDV PV  ++V+N+GD L++++N +Y SVEHRVL+ +  E R+SIA F++P   DS+  P PELI      EK   + +F   DY+  +   +   K
Sbjct:  121 IEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPVKHSIVVNLGDQLEVITNGKYKSVEHRVLSQTDGEGRMSIASFYNPGS-DSVIFPAPELIGKEAEKEKKENYPRFVFEDYMKLYSAVKFQAK 299          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29
Identity = 78/208 (37.50%), Postives = 122/208 (58.65%), Query Frame = -2
Query:  108 LTEPEL-KEVPEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEG---RMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQ-DDKGGLQIKHGEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLDGKTLVNYYRL 716
            L +P L  ++P   R     ++  V+ + ++L   +   L +K + L EK F +    + M  +YYP CPQPD  +G+T H+D   LT+L+Q +D  GLQIK   +WV VKP+P A ++NIGD+L+I++N  Y S+EHR + NS  E R+SIA F +      + GP   L+  +K ARF++ T  +Y    F++ LDGK  ++  R+
Sbjct:  154 LRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEIKPEEL-EKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKE-RLSIATFHNVGMYKEV-GPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358          
BLAST of CB304568 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.063e-27
Identity = 69/186 (37.10%), Postives = 109/186 (58.60%), Query Frame = -2
Query:  138 PEICRKEAVEWNHHVKQLGELLFGVLCEGLGLKTDRLKEKTFLEGRMMVGHYYPYCPQPDLTVGITSHTDPGPLTILLQDDKGGLQIKH--GEEWVDVKPVPGALVINIGDILQIMSNDEYISVEHRVLANSSPEPRISIAVFFSPSERDSLYGPFPELISPEKPARFRQFTHTDYITRFFTKQLD 689
            PE  R+   +++  +  L   L GVL E +GL T+ L +      + +V ++YP CPQPDLT+G+  HTDPG +T+LLQD  GGLQ     G+ W+ V+PV GA V+N+GD   ++SN  + + +H+ + NS+   R+SIA F +P++   +Y P   +   EKP      T+T+   +  +K L+
Sbjct:  151 PEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSN-SSRLSIATFQNPAQEAIVY-PL-SVREGEKPILEAPITYTEMYKKKMSKDLE 333          
The following BLAST results are available for this feature:
BLAST of CB304568 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCH1_ARATH7.566e-5048.021-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
DV4H_CATRO1.208e-4746.86Deacetoxyvindoline 4-hydroxylase OS=Catharanthus r... [more]
ACCH3_ARATH4.590e-4744.551-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH2_ARATH7.328e-4547.691-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCH3_SOLLC3.637e-4445.051-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GSL_ARATH5.807e-4241.46Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
FLS1_ARATH6.659e-3039.15Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
ACCO1_ARATH1.136e-2941.111-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
SRG1_ARATH1.483e-2937.50Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
FL3H_MALDO1.063e-2737.10Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IVaR_F11 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IVaR_F11 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304568 ID=CB304568; Name=CB304568; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTCTACACTTGAATTGTTATTCTT
ACGTAAGAATAGTTTATACAGGCACAAACAACCAGATTTACCAAGTTTTG
TTTCTTACAGCCTATAGTAATTCACCAATGTTTTTCCATCTAACTGCTTT
GTGAAGAACCTTGTTATATAGTCCGTGTGTGTGAACTGCCGAAAACGAGC
TGGCTTCTCTGGGGATATCAGCTCCGGGAATGGTCCATAAAGGCTGTCCC
TCTCGCTTGGACTGAAGAAAACAGCAATTGAGATTCGTGGTTCCGGGGAC
GAATTAGCCAATACTCTATGCTCTACACTTATGTATTCATCATTGGACAT
AATCTGAAGTATATCCCCAATGTTAATAACCAGAGCTCCTGGAACTGGTT
TAACATCCACCCATTCCTCACCATGCTTAATTTGCAGCCCACCTTTATCA
TCTTGCAACAAGATTGTCAATGGCCCTGGATCAGTATGAGATGTGATCCC
CACTGTCAGATCAGGCTGCGGACAGTAGGGATAATAATGGCCCACCATCA
TCCTCCCTTCCAGGAAGGTCTTTTCCTTCAACCTATCGGTTTTCAACCCC
AAACCTTCACACAGCACCCCAAACAAAAGCTCTCCGAGCTGTTTTACATG
GTGGTTCCACTCGACTGCCTCTTTCCTACATATTTCAGGAACTTCTTTCA
GCTCTGGCTCCGTCAGACCTAGCCTTATCTGC
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