CB304605 | Citrus Genome Database

Overview


Name	CB304605
Unique Name	CB304605
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	362

Libraries


Library Name	Type
Flavedo Mature	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:123..483.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.319e-28
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  384 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.811e-28
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADL+VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  385 GETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.811e-28
Identity = 60/62 (96.77%), Postives = 60/62 (96.77%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  384 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.963e-27
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  379 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.564e-27
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  384 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.348e-27
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  385 GETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.373e-27
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  385 GETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.272e-26
Identity = 57/62 (91.94%), Postives = 60/62 (96.77%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  383 GETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.702e-26
Identity = 57/62 (91.94%), Postives = 59/62 (95.16%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  383 GETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

[Close]

BLAST of CB304605 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.835e-26
Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = -1

Query:  174 GETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 359
            GETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  383 GETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

The following BLAST results are available for this feature:

BLAST of CB304605 vs. ExPASy Swiss-Prot

BLAST of CB304605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	2.319e-28	98.39	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO_ORYSJ	8.811e-28	96.77	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO2_HEVBR	8.811e-28	96.77	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO_ALNGL	1.963e-27	95.16	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO1_HEVBR	2.564e-27	95.16	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO2_MAIZE	3.348e-27	95.16	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO1_MAIZE	4.373e-27	95.16	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_SOLLC	1.272e-26	91.94	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO_MESCR	3.702e-26	91.94	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO_ARATH	4.835e-26	88.71	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	FLAVEDO0001_IaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_C08 3, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CB304605 ID=CB304605; Name=CB304605; organism=Citrus sinensis; type=EST; length=362bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCAAAAACTGTGTCAAAATTA
TTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCCATAAAAATCCAT
TTTACATAACTTATTGAAGTAAACCTCCATTGCTCAAATCCAGCACCACA
CCAAATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGCACGGAACTT
GGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAATTCTCAAAA
GCTGATTATACTTTGCAAGACGCTCTGACCTGCATGGGGCTCCTGTCTTA
ATTTGACCCGTGGCCAAGCCCACTGAAAGATCGGCAATGAAAGTATCTTC
AGTCTCACCACC