CB304617
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.459e-53 Identity = 99/131 (75.57%), Postives = 116/131 (88.55%), Query Frame = -1 Query: 235 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 627 DTM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TGQP E++ KDLSR+KRF ++EA+EYGLID+I+RPPRIKED PR+D GLG Sbjct: 149 DTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.407e-24 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +QEA+EYGLIDR+I Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSAQEAMEYGLIDRVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.055e-23 Identity = 58/112 (51.79%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +QEA EYGLIDR+I Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSAQEAKEYGLIDRVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP1_PROMT (ATP-dependent Clp protease proteolytic subunit 1 OS=Prochlorococcus marinus (strain NATL2A) GN=clpP1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.055e-23 Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 DTMQ +K + T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L ++D + KELS +TGQP E+I +D R EA+EYG+ID + Sbjct: 77 DTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMIHQPLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQPIERIREDTDRDFYMSPSEAIEYGIIDNV 187
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_PELTS (ATP-dependent Clp protease proteolytic subunit OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=clpP PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.505e-23 Identity = 54/111 (48.65%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 295 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI 627 DTMQ ++SPV T C+G A +A LLA G KG R ++P +RI + P G +GQA DI A E+LR+R ++ + LSR TGQP EKI +D R +QEA EYG+ID + Sbjct: 79 DTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARILIHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEAKEYGIIDEV 189
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.505e-23 Identity = 58/112 (51.79%), Postives = 72/112 (64.29%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+LRVR + + + TGQP EKI +D+ R ++EA YGLIDR+I Sbjct: 82 DTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSAEEAKNYGLIDRVI 193
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_RALME (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.332e-22 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID++I Sbjct: 101 DTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_CLOCE (ATP-dependent Clp protease proteolytic subunit OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=clpP PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.332e-22 Identity = 56/112 (50.00%), Postives = 70/112 (62.50%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA GEKG R A+P S I + P G ARGQA DI+ A+ +LR RD + K LS +TGQP +KI KD R + EA YG+ID I+ Sbjct: 79 DTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEIMIHQPLGGARGQATDIKIHAENILRTRDKLNKILSERTGQPLDKIEKDTERDFFMSADEAKAYGIIDDIM 190
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNPX (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain WH8102) GN=clpP2 PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.332e-22 Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T CVG A + FLL G KG RS++ SRI + P G ARGQA DIR +ADE+L +++ + +ELS +TGQP ++I +D R EA+EYGLID +I Sbjct: 77 DTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILYLKERLNQELSDRTGQPLDRIQQDTDRDFFMSPGEAVEYGLIDSVI 188
BLAST of CB304617 vs. ExPASy Swiss-Prot
Match: CLPP_RALEJ (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain JMP134) GN=clpP PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.739e-22 Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = -1 Query: 292 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 627 DTMQ +K V T C+G A + FLLA G KG RSA+P SRI + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +A++YGLID++I Sbjct: 101 DTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVI 212 The following BLAST results are available for this feature:
BLAST of CB304617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304617 ID=CB304617; Name=CB304617; organism=Citrus sinensis; type=EST; length=627bpback to top |