CB304628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.733e-34 Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT D SL +AFS +GDI +SKIINDRETGRSRGFGFV F+DEKSMRDAIEGMNGQ LDGRNITVNEAQ Sbjct: 4 VEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.647e-32 Identity = 65/80 (81.25%), Postives = 74/80 (92.50%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT D +L AFS YG++L+SKIINDRETGRSRGFGFV F+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 6 VEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.792e-32 Identity = 63/80 (78.75%), Postives = 74/80 (92.50%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT D +L AF+ YGD+++SKIINDRETGRSRGFGFV F+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 6 VEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.821e-31 Identity = 63/80 (78.75%), Postives = 74/80 (92.50%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT + SL AFS +G++++SKIINDRETGRSRGFGFV F+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 6 VEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.305e-29 Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT D L FS +GD+++SKIINDRE+GRSRGFGFV F+DEK+MRDAIE MNG+ LDGR ITVNEAQ Sbjct: 4 VEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.704e-29 Identity = 59/80 (73.75%), Postives = 70/80 (87.50%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT D+ L FS +G++++SKIINDRETGRSRGFGFV F+DEKSM+DAI+ MNG+ LDGR ITVNEAQ Sbjct: 4 VEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.226e-29 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGL WAT D SL AFS YGD+++SKII DRETGRSRGFGFV F +++MR AIE MNGQ+LDGRNITVNEAQ Sbjct: 4 VEYRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.458e-29 Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT++ SL AF++YG+IL+SK+I DRETGRSRGFGFV F E SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 6 VEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.721e-27 Identity = 55/80 (68.75%), Postives = 68/80 (85.00%), Query Frame = -3 Query: 440 VEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 679 VE+RCFVGGLAWAT + +L +AF+ +G +++SK+I DRETGRSRGFGFV F E+SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 6 VEYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CB304628 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 49/64 (76.56%), Postives = 55/64 (85.94%), Query Frame = -3 Query: 440 SSLHEAFSAYGDILESKIINDRETGRSRGFGFVIFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 631 +SLH AFS YG++LESKII DRET RSRGFGFV F E++MR AIEGMNG+ LDGRNITVNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of CB304628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304628 ID=CB304628; Name=CB304628; organism=Citrus sinensis; type=EST; length=681bpback to top |