CB304629

Overview
NameCB304629
Unique NameCB304629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:1..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.088e-69
Identity = 137/174 (78.74%), Postives = 153/174 (87.93%), Query Frame = -2
Query:  196 LGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 717
            LGKFD AKLRKLRPSFKENGGTVTAGNASSISDGA ALVLVSGEK L+LGL V+AKI GY DAAQ PE FTTAPALAIPKAI++AGLE+SQVD YEINEAFAVVALANQKLLG+ P+KVNV+GGAV+LGHPLGCSGARIL+TLLG+L+++N KY          GASALV+EL+
Sbjct:  230 LGKFDAAKLRKLRPSFKENGGTVTAGNASSISDGAAALVLVSGEKALQLGLLVLAKIKGYGDAAQEPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.210e-69
Identity = 136/174 (78.16%), Postives = 150/174 (86.21%), Query Frame = -2
Query:  196 LGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 717
            LGKFD AKL+KLRPSFKE+GG+VTAGNASSISDGA ALVLVSGEK L+LGL VIAKI GYADAAQAPE+FTT PALAIPKAI  AGL+ASQVD YEINEAF+VVALANQKLLGL+P+++N HGGAV+LGHPLGCSGARILVTLLGVLR K  KY          GASALV+E +
Sbjct:  232 LGKFDAAKLKKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLHVIAKIRGYADAAQAPELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.448e-47
Identity = 98/167 (58.68%), Postives = 131/167 (78.44%), Query Frame = -2
Query:  196 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 696
            KL+ +R  FK NG TVTA NAS+++DGA+ALVL+S  KV +LGL+ +AKI G+ +AAQ PE FTT+P+LAIPKA+ +AG+EASQVD YEINEAF+VVA+AN K+LGL+P++VN++GG VA+GHPLG SG+RI+ TL  +L QK+ K           GAS++V+E V
Sbjct:  230 KLKSVRAVFKSNG-TVTAANASTLNDGASALVLMSAAKVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIERV 395          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 179.489 bits (454), Expect = 1.582e-44
Identity = 91/174 (52.30%), Postives = 128/174 (73.56%), Query Frame = -2
Query:  196 LGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 717
            +GKF+  +L+  R  F++  GTVTA NAS ++DG  ALVLVS  K+ +LGL+ +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q+  ++          GASA+V+E +
Sbjct:  224 IGKFNEERLKSARTVFQKENGTVTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGVAGVCNGGGGASAVVIEKI 397          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.698e-44
Identity = 91/174 (52.30%), Postives = 128/174 (73.56%), Query Frame = -2
Query:  196 LGKFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 717
            +GKF+  +L+  R  F++  GTVTA NAS ++DG  ALVLVS  K+ +LGL+ +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q+  ++          GASA+V+E +
Sbjct:  224 IGKFNEDRLKSARTVFQKENGTVTAPNASKLNDGGAALVLVSEAKLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGAAGVCNGGGGASAIVIEKI 397          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.647e-43
Identity = 92/165 (55.76%), Postives = 122/165 (73.94%), Query Frame = -2
Query:  202 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 696
            K+  L+P+F  NG TVT  NAS ++DGA++++L+S     +LGL+ +A+I GYADA QAP  F TAPALAIPKA+ NAG+  SQVD +EINEAFAVV LAN K+L ++ +K+NV+GGAVALGHP+G SG RI+VTL  +L+ KN KY          G++ALV+E
Sbjct:  249 KIPNLKPAFTPNG-TVTPANASKLNDGASSVILMSESHAKELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKNAGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLTHLLQNKNLKYGVAAICNGGGGSTALVLE 412          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40
Identity = 92/169 (54.44%), Postives = 121/169 (71.60%), Query Frame = -2
Query:  196 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLK-LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 696
            KLR  R  F++  GTVTA NAS I+DGA A++LVS EKVLK   L+ +A I G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q+  K           GAS++V+E +
Sbjct:  231 KLRSARTVFQKENGTVTAANASPINDGAAAVILVS-EKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIEKI 398          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.414e-39
Identity = 85/166 (51.20%), Postives = 116/166 (69.88%), Query Frame = -2
Query:  202 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 696
            KL+  R  F+   GTVTA NAS I+DGA A++LVS   + +  L+ +A + G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q+  K           GAS++V+E
Sbjct:  231 KLKSARTVFQRENGTVTAANASPINDGAAAIILVSERVLKEKNLKPLAIVKGWGEAAHLPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIE 396          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_YARLI (Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica GN=PAT1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.214e-36
Identity = 87/167 (52.10%), Postives = 112/167 (67.07%), Query Frame = -2
Query:  196 KLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 696
            KL+ L+P F + G +VTAGNAS I+DGA+A+V+ SG K  +LG  V+AKI  YADAA AP  FT AP+LAIP A+  AGL    +  +EINEAF+ VALAN   LG++  KVNV GGAVALGHP+G SG RI VTL+  L  K  +Y           ++A+V++ V
Sbjct:  230 KLKGLKPVFDKQG-SVTAGNASPINDGASAVVVASGTKAKELGTPVLAKIVSYADAATAPIDFTIAPSLAIPAALKKAGLTKDDIALWEINEAFSGVALANLMRLGIDKSKVNVKGGAVALGHPIGASGNRIFVTLVNAL--KEGEYGVAAICNGGGASTAIVIKKV 393          
BLAST of CB304629 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35
Identity = 74/147 (50.34%), Postives = 106/147 (72.11%), Query Frame = -2
Query:  271 KFDPAKLRKLRPSFKENGGTVTAGNASSISDGATALVLVSGEKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 711
            + D +K+ KL+  F++  GTVTA NAS+++DGA A+VL++ E   +L ++ +A+I  +ADAA  P  F  APA A+PK +  AGL+   +  +E+NEAF+VV LAN K+L ++P KVNVHGGAV+LGHP+G SGARI+V L   L+Q
Sbjct:  255 RVDFSKVPKLKTVFQKENGTVTAANASTLNDGAAAVVLMTAEAAQRLKVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHALKQ 401          
The following BLAST results are available for this feature:
BLAST of CB304629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIC1_ARATH1.088e-6978.74Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIC2_ARATH9.210e-6978.16Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIL_SCHPO4.448e-4758.68Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIA_CANTR1.582e-4452.30Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR2.698e-4452.30Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL1_DICDI6.647e-4355.76Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIL_YEAST3.087e-4054.44Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SACBA3.414e-3951.20Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
THIL_YARLI1.214e-3652.10Acetyl-CoA acetyltransferase OS=Yarrowia lipolytic... [more]
THIL_RAT5.101e-3550.34Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0001_IaR_F05 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0001_IaR_F05 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304629 ID=CB304629; Name=CB304629; organism=Citrus sinensis; type=EST; length=718bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGAGCAAAGCCAGCCAGATA
ATTATTATCTTTTTATTGAAGACGAAAGCACATATGAATAAGAAATGGAG
ATACAATTGCACAACACCCCACCCAAATGGGCCATAATTATCCTCCACAA
GAAGGGTGCAACCTCGTTGATAATAATCCGAACAGAAAATGCTTACACAA
GCTCTACAACAAGTGCCGATGCACCTCCTCCTCCGTTGCAAACGCCACCA
ACACCGTATTTCCAGTTTTTCTGCCTAAGTACCCCCAAAAGTGTGACCAA
GATACGAGCTCCGCTGCAGCCCAGAGGATGTCCCAAAGCTACTGCTCCAC
CATGGACATTAACCTTGTCAGGATTTAGTCCAAGCAATTTCTGGTTTGCA
AGGGCGACGACAGCAAAGGCCTCATTTATTTCGTAACAGTCAACTTGAGA
AGCCTCCAAGCCAGCATTTGAAATGGCTTTAGGTATGGCTAGGGCTGGAG
CTGTTGTAAACATCTCTGGTGCCTGAGCAGCATCAGCATATCCTGTGATC
TTGGCGATCACTTGCAAACCCAGCTTAAGTACCTTCTCTCCACTGACTAG
AACTAATGCTGTAGCTCCATCACTTATACTAGAGGCATTGCCAGCCGTAA
CAGTTCCTCCATTCTCCTTGAAACTTGGTCGAAGCTTCCTCAATTTTGCC
GGGTCAAACTTGCCTAAA
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