CB304694

Overview
NameCB304694
Unique NameCB304694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig196 contig Csv1_Contig196:238..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304694 vs. ExPASy Swiss-Prot
Match: CYNS_ORYSJ (Cyanate hydratase OS=Oryza sativa subsp. japonica GN=CYN PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 9.893e-24
Identity = 52/73 (71.23%), Postives = 57/73 (78.08%), Query Frame = -3
Query:  351 IQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXVITFDGKYLPYSEQKSEHM 569
            + EP +YRLNEAVMHFGESIKEIINEEFGDGI SAIDFYCS             V+TFDGKYLPYSEQ+S+HM
Sbjct:   87 VHEPAIYRLNEAVMHFGESIKEIINEEFGDGIMSAIDFYCSVDKVQGADGKDRVVVTFDGKYLPYSEQRSDHM 159          
BLAST of CB304694 vs. ExPASy Swiss-Prot
Match: CYNS_ARATH (Cyanate hydratase OS=Arabidopsis thaliana GN=CYN PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.209e-21
Identity = 50/73 (68.49%), Postives = 57/73 (78.08%), Query Frame = -3
Query:  351 IQEPTVYRLNEAVMHFGESIKEIINEEFGDGITSAIDFYCSXXXXXXXXXXXXXVITFDGKYLPYSEQKSEHM 569
            IQEPT+YRLNEAVMHFGESIKEIINE+FGDGI SAIDFYCS             V+T DGKYL +SEQ++E+M
Sbjct:   84 IQEPTIYRLNEAVMHFGESIKEIINEDFGDGIMSAIDFYCSVDKIKGVDGNNRVVVTLDGKYLSHSEQRTENM 156          
The following BLAST results are available for this feature:
BLAST of CB304694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CYNS_ORYSJ9.893e-2471.23Cyanate hydratase OS=Oryza sativa subsp. japonica ... [more]
CYNS_ARATH1.209e-2168.49Cyanate hydratase OS=Arabidopsis thaliana GN=CYN P... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIIaR_E10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIIaR_E10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304694 ID=CB304694; Name=CB304694; organism=Citrus sinensis; type=EST; length=571bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAGCACCAAACATTGTACA
ACATTATTATAATACAGTGTTAATGTAATACAACATAATACAATACACTT
GCATTAAAATAATGCAATACAACATAATACAATACAGTGTACCAAACGCA
CCCTTAATGCTAGGAAAATCACACAAGACCCCCCGCGCGCACTCGCACAA
ACAATAATCTTTACATTACAAAGCACAGGCCATGAAGCATCCAACTATGG
TAGCTCCAGGGAGTTCACTCGTACAATAAGTATTAAGCATGTATAGAATC
TGCACCAGGTAGGAGATGGATTAACTTCACTGCTGTTGTAGTCTTGAAAC
CATGTGCTCCGACTTCTGCTCACTATAAGGCAAATATTTTCCATCAAAAG
TAATGACCACACGATCTTTCCCATCCACACCTTTAACTTTGTCAACAGAG
CAGTAAAAGTCTATAGCCGACGTGATGCCATCACCAAACTCCTCATTGAT
AATTTCCTTAATACTCTCACCAAAATGCATAACCGCTTCGTTTAACCTAT
AAACGGTGGGTTCCTGGATCA
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