CB304906

Overview
NameCB304906
Unique NameCB304906
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length571
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13306 contig Csv1_Contig13306:17..587. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304906 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.664e-13
Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = -1 
Query:  284 TFPLDLVRRRKQLEGAGGRARVYTTGLFGTFQYIFRTEGFRGLYRGILPEYYKVVPGVGICFMTYETLKMLL 499
            T+P+DL+RRR Q++G GG+  +Y  G F  F+ I R EG  GLY G++P Y KV+P + I F  YE +K +L
Sbjct:  353 TYPIDLIRRRLQVQGIGGKDILYN-GTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAISISFCVYEVMKKIL 423
The following BLAST results are available for this feature:
BLAST of CB304906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MCFB_DICDI4.664e-1347.22Mitochondrial substrate carrier family protein B O... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IaR_H04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IaR_H04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304906 ID=CB304906; Name=CB304906; organism=Citrus sinensis; type=EST; length=571bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCAAACTGATGTTATTGAG
AAATGTGAATAACTATGATAAGTACACTTGAAACTGTGATTTACGTTTCA
CTAATTTATACACGAAAAAAATATAATTCTCACGTAAGAATCACATATTA
ATCACCATGAGAGAGCAGATCAAAATGAATGGTTATATGCTATTACATCA
CAACTCTTAACCACCTCATCCTTACCATTGTAGACGGTGAAGTCCAGAGC
TGACGGCGACTATAGTCAGGAAGAAATATCTGCTAAAAGCATCTTCAGTG
TTTCATATGTCATGAAACAAATACCGACTCCAGGAACCACTTTGTAATAT
TCAGGAAGAATTCCTCTGTACAGACCACGGAAGCCTTCAGTCCGGAATAT
GTACTGAAATGTACCAAAAAGACCCGTTGTGTAAACCCTGGCCCGGCCAC
CCGCCCCTTCGAGTTGCTTTCTTCGCCTCACCAAATCCAGAGGAAATGTT
GCTGAGAGTAGTGCCACCTTATGATGGAACCACCAACTGTTGATGATGCA
ATGCCTGAAAGACTGCCACAT
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