CB304909
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: FA18_ARATH (Uncharacterized FAM18-like protein At1g09330 OS=Arabidopsis thaliana GN=At1g09330 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.112e-54 Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = -2 Query: 278 VGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRFTSTLQSA 613 VGLRWWNEIND+GESVWKFE LD ES+ARMNKKDSWLFWWTLYL+A AW +LG+FSLIRFQADYLLVVGVCL+L++ANIIGFTKC+KDAKKQ QQFASQTIASRF ST+QSA Sbjct: 71 VGLRWWNEINDLGESVWKFESLDQESLARMNKKDSWLFWWTLYLAAAAWFILGVFSLIRFQADYLLVVGVCLSLNVANIIGFTKCKKDAKKQFQQFASQTIASRFQSTVQSA 182
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_DEBHA (Golgi apparatus membrane protein TVP23 OS=Debaryomyces hansenii GN=TVP23 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16 Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = -2 Query: 281 VGLRWWNEI------NDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRFTSTLQS 613 VGLRWWNE+ N E+VW FE +D +N DS +FW LY+ AW+VLG +L++F+ YLL++ + ++LS+ N + FTKC K K + I SR T L S Sbjct: 109 VGLRWWNEVSVIKSTNGEFENVWVFETVDPNRY--INPIDSKVFWTLLYVQPAAWVVLGFLALLKFEFLYLLLIIISISLSLTNAMAFTKCDKFGK---ANHLATDIFSRATGNLFS 220
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_PICGU (Golgi apparatus membrane protein TVP23 OS=Pichia guilliermondii GN=TVP23 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 3.332e-15 Identity = 48/116 (41.38%), Postives = 64/116 (55.17%), Query Frame = -2 Query: 302 VGLRWWNEINDMG-------ESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQ-----IQQFASQTIASR 613 VGLRWWNE+N + E+VW FE D +N DS +FW LY VAWIVLGI ++++F+ YL+++ + + LS N + FTKC K K AS TI SR Sbjct: 116 VGLRWWNEVNFIESSSTGEFENVWVFESADPSRY--INPIDSKVFWTLLYGQPVAWIVLGILAVLKFEFLYLILILIAIFLSFTNALAFTKCDKFGKANNLATGFLSRASGTILSR 229
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_YARLI (Golgi apparatus membrane protein TVP23 OS=Yarrowia lipolytica GN=TVP23 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15 Identity = 36/90 (40.00%), Postives = 58/90 (64.44%), Query Frame = -2 Query: 344 VGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAK 613 VGLRWWNE ++ GESVW FE D + +N DS +FW LY + V W+ L + +L++FQ L++V + ++L++ N + +++C K K Sbjct: 67 VGLRWWNEASETGESVWVFETADPQRY--INPIDSKVFWMMLYGAPVLWVCLAVLALLKFQFLSLILVFIAVSLTVTNAMAYSRCDKFGK 154
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: FA18_DROME (Uncharacterized FAM18-like protein CG5021 OS=Drosophila melanogaster GN=CG5021 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 5.683e-15 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = -2 Query: 299 VGLRWWNEINDMGESVWKFECLDHES-MARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRF 613 VGLRWWN ++D G S W FE + ES +R+NK + +FW L L V W + +F+L + +LL+V + + L+ AN+ G+ KC A K + A+ + ++F Sbjct: 92 VGLRWWNYVDDDGVSHWVFESKNSESYQSRVNKNEQRIFWLGLILCPVFWGLFFLFALFGLKFKWLLLVMIAIALNAANLYGYVKCNYGANKDLNSAATDFVKTQF 197
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_SCHPO (Golgi apparatus membrane protein tvp23 OS=Schizosaccharomyces pombe GN=tvp23 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -2 Query: 281 VGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRFTSTLQS 613 VGLRW NE GES+W FE D S R N D FW+ LYL WI+LGI ++IRF+ +L +V V + L+ N +++C KDAK++ + + +S F S S Sbjct: 102 VGLRWRNETGVDGESIWIFESAD-PSRPR-NAVDQKTFWYALYLYPFIWIILGIVAIIRFEFLWLALVAVAIGLTSVNTAAYSRCDKDAKRRWATELADSNSSGFVSRFLS 210
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_COCIM (Golgi apparatus membrane protein TVP23 OS=Coccidioides immitis GN=TVP23 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15 Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = -2 Query: 287 VGLRWWNEIN-DMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQA-DYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRFTSTL 613 VGLRWWNE+N G+S W FE D + +N D FW +LY + WI L I ++IR Q+ +L +VG+ L L++ N + F++C D Q FAS ++ TS L Sbjct: 71 VGLRWWNEVNTSTGDSNWVFESSDPNTRT-INATDKRFFWLSLYATPALWIGLAILAIIRLQSVIWLSLVGIALILTVTNTLAFSRC--DRFSQASTFASSALSGGITSNL 178
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: FA18A_DICDI (Uncharacterized FAM18-like protein 1 OS=Dictyostelium discoideum GN=DDB_G0276319 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.266e-14 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = -2 Query: 311 VGLRWWNEINDMGESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTI 613 VGLRWWN+I + G + W FE + +S ++N +S +FW + AW V I SL +L+V VC L+ AN++G+ KC KDA+K+++ A I Sbjct: 88 VGLRWWNQIKEDGTNNWVFESVQDKS--QVNPAESLMFWVPVLAFTAAWFVFSIISLFGLSFLWLVVEIVCFLLAGANLLGYIKCAKDARKKVKGMAQSYI 186
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_PICST (Golgi apparatus membrane protein TVP23 OS=Pichia stipitis GN=TVP23 PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 8.207e-14 Identity = 47/117 (40.17%), Postives = 66/117 (56.41%), Query Frame = -2 Query: 281 VGLRWWNEIN----DMGE--SVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTIASRFTSTLQS 613 VGLRWWNE N ++GE +VW FE D +N DS +FW LY V W+V +++FQ YLL++ + ++LS+ N + FTKC K K FA+ I SR T ++ S Sbjct: 120 VGLRWWNETNATEGNVGEFENVWVFETADPNRY--INPIDSKVFWILLYAQPVVWMVFAFLCVLKFQFLYLLLIIIAISLSLTNAMAFTKCDKFGK--ANNFATD-IFSRATGSIFS 231
BLAST of CB304909 vs. ExPASy Swiss-Prot
Match: TVP23_PHANO (Golgi apparatus membrane protein TVP23 OS=Phaeosphaeria nodorum GN=TVP23 PE=3 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 1.400e-13 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = -2 Query: 311 VGLRWWNEINDM-GESVWKFECLDHESMARMNKKDSWLFWWTLYLSAVAWIVLGIFSLIRFQADYLLVVGVCLTLSIANIIGFTKCQKDAKKQIQQFASQTI 613 VGLRWWNE++ G+ W FE D ES + N D FW LY+ V W+V+ + +L F +L +V + L L+I N + F++C K + Q FAS + Sbjct: 76 VGLRWWNEVDGATGDGRWVFESADPESREQ-NATDKRFFWMALYVQPVLWVVMAVVALFGFNFIWLTLVAIALVLTITNTLAFSRCDKFS--QASGFASNAM 174 The following BLAST results are available for this feature:
BLAST of CB304909 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304909 ID=CB304909; Name=CB304909; organism=Citrus sinensis; type=EST; length=614bpback to top |