CB304918

Overview
NameCB304918
Unique NameCB304918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13435 contig Csv1_Contig13435:4..534. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CB304918 vs. ExPASy Swiss-Prot
Match: Y1754_ARATH (Uncharacterized protein At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 3.234e-39
Identity = 79/110 (71.82%), Postives = 91/110 (82.73%), Query Frame = -1 
Query:  203 EWEMATKSEKAIPKIVWNERKRRFETEDKEAYVEYVVRENGKVMDLVHTYVPSSKRGLGLASHLCGAAFNHAKSHSMSIIPTCSYVSDTYLPRNPTWNSIIYSEDPRSII 532
            E +MAT+     PKIVWNE KRRFETED EA++EY +R NGKVMDLVHTYVPS KRGLGLASHLC AAF HA SHS+SIIP+CSYVSDT+LPRNP+W  +I+SE  +S I
Sbjct:    9 EAKMATEP----PKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSYVSDTFLPRNPSWKPLIHSEVFKSSI 114
The following BLAST results are available for this feature:
BLAST of CB304918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1754_ARATH3.234e-3971.82Uncharacterized protein At1g77540 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIIaR_A10 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIIaR_A10 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304918 ID=CB304918; Name=CB304918; organism=Citrus sinensis; type=EST; length=532bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTAAATACAGTGAGCGCATA
TTATTTGCAATAGGCAAAGGAAAATGGCTATTCTGTATCTGCAATAATTA
TAGGCCTCAATAGTGTGAGCCTAAGAGATAAGAGAACAGAACCTTCACTT
GGATCACAAACAATTACACAGGCACCTGAAAAGTTAAAGATGGCGACATT
CATATGATAGATCTGGGATCTTCTGAGTATATGATAGAATTCCAGGTTGG
ATTCCGAGGAAGATAAGTGTCAGAGACGTAAGAGCAAGTGGGGATGATGG
ACATGGAGTGAGATTTGGCGTGATTGAAGGCAGCACCACAGAGATGAGAA
GCCAAGCCTAAGCCTCTTTTTGAACTTGGTACGTATGTGTGAACCAAGTC
CATCACTTTTCCATTTTCTCTCACCACATATTCAACGTAAGCTTCTTTGT
CTTCCGTTTCGAACCTCCGCTTCCTCTCGTTCCACACGATCTTTGGTATC
GCCTTCTCTGATTTCGTTGCCATCTCCCACTC
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