CB304976
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 9.693e-51 Identity = 100/120 (83.33%), Postives = 103/120 (85.83%), Query Frame = -2 Query: 219 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 578 IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE GIQHRVTK+DAMKWFQVKYEGVILNKSQNI Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1 SV=2) HSP 1 Score: 199.519 bits (506), Expect = 9.693e-51 Identity = 100/120 (83.33%), Postives = 103/120 (85.83%), Query Frame = -2 Query: 219 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 578 IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE GIQHRVTK+DAMKWFQVKYEGVILNKSQNI Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 1.266e-50 Identity = 101/120 (84.17%), Postives = 102/120 (85.00%), Query Frame = -2 Query: 219 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 578 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFS TGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLE GIQHRVTK+DAMKWFQVKYEGVILNKSQ I Sbjct: 61 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.828e-49 Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = -2 Query: 225 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKSQ 578 IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE GIQHRVTKEDAMKWFQVKYEGVILNK+Q Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 1.828e-49 Identity = 98/118 (83.05%), Postives = 101/118 (85.59%), Query Frame = -2 Query: 225 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKSQ 578 IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE GIQHRVTKEDAMKWFQVKYEGVILNK+Q Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_CHLRE (60S ribosomal protein L11 OS=Chlamydomonas reinhardtii GN=RPL11 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.452e-38 Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = -2 Query: 228 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNKS 578 IRRNEKI+CYVTVRG+KA L++ GL VKE+EL+R+NFS TG FGFGIQEHIDLG+KYDPSTGIYGMDF+V LE G++H+VTKEDA+KWFQ +++GV+LNK+ Sbjct: 51 IRRNEKISCYVTVRGEKAYDLVKRGLAVKEFELIRKNFSDTGNFGFGIQEHIDLGLKYDPSTGIYGMDFYVCLERRGYRVARRRKQKAHVGVKHKVTKEDAIKWFQQEFDGVVLNKA 167
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_DROME (60S ribosomal protein L11 OS=Drosophila melanogaster GN=RpL11 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 7.967e-37 Identity = 77/115 (66.96%), Postives = 86/115 (74.78%), Query Frame = -2 Query: 234 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILN 578 IRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL G QHR+TKEDAMKWFQ KY+G+ILN Sbjct: 67 IRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_SCHPO (60S ribosomal protein L11 OS=Schizosaccharomyces pombe GN=rpl11a PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 7.456e-35 Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = -2 Query: 231 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVILNK 578 IRRNEKIAC+VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGIQEHIDLGIKYDPS GIYGMDF+VV++ G H++ ED + WF+ KY+ V+L K Sbjct: 59 IRRNEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_RAT (60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.701e-34 Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = -2 Query: 237 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVIL 578 IRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFS TG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL G +HR++KE+AM+WFQ KY+G+IL Sbjct: 62 IRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CB304976 vs. ExPASy Swiss-Prot
Match: RL11_PONAB (60S ribosomal protein L11 OS=Pongo abelii GN=RPL11 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 3.701e-34 Identity = 71/114 (62.28%), Postives = 85/114 (74.56%), Query Frame = -2 Query: 237 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSGTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXGIQHRVTKEDAMKWFQVKYEGVIL 578 IRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFS TG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL G +HR++KE+AM+WFQ KY+G+IL Sbjct: 62 IRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSITDKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175 The following BLAST results are available for this feature:
BLAST of CB304976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304976 ID=CB304976; Name=CB304976; organism=Citrus sinensis; type=EST; length=579bpback to top |