CB304990

Overview
NameCB304990
Unique NameCB304990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:1404..2047. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.067e-38
Identity = 78/141 (55.32%), Postives = 95/141 (67.38%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            AVVKE                  DVE+ GF VPK  QVFVNVWAIGRD + W+N   F PERFLG + D +G+++EL PFGAGRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FGLT+ K  PLHAVP
Sbjct:  365 AVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDWKLPNGVGSEDLDMDETFGLTLHKTNPLHAVP 505          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.434e-37
Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAQPLHAVP 643
            AVVKE                  D EI GF V K  QV VNVWAIGRD S WDNP  F PERFLG + D +G+++EL PFGAGRRICPG+PLA++ + LML SL+ SFDWKL     + ++DM++ FGLT+ K  PLHAVP
Sbjct:  364 AVVKETFRLHTPVPLLIPRKAESDAEILGFMVLKDTQVLVNVWAIGRDPSVWDNPSQFEPERFLGKDMDVRGRDYELTPFGAGRRICPGMPLAMKTVSLMLASLLYSFDWKLPKGVLSEDLDMDETFGLTLHKTNPLHAVP 504          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.305e-36
Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            AVVKE                  DVE+ GF VPK  QV VNVWAIGRD S W+NP  F PERF+G + D KG+++EL PFG GRRICPGLPLA++ + LML SL+ SFDWKL N     ++DM++ FG+T+ +   L+A+P
Sbjct:  364 AVVKETFRLHPAAPLLVPRKAESDVEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDWKLPNGVVSEDLDMDETFGITLHRTNTLYAIP 504          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.214e-35
Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = -2
Query:  233 DVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 574
            DV+I GF VPK  QV VNVWAIGRD S W+NP  F PERFL    D KG++FELIPFG+GRR+CPG+ +A++ +H++L SL+ SFDWKL N     N+DM + FGLT+ KA+ L AVP
Sbjct:  388 DVQIMGFLVPKNTQVVVNVWAIGRDASVWENPMKFEPERFLLRETDVKGRDFELIPFGSGRRMCPGISMALKTMHMVLASLLYSFDWKLQNGVVPGNIDMSETFGLTLHKAKSLCAVP 505          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.721e-34
Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = -2
Query:  233 VEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 571
            VE++G+T+P G  VFVN WAIGRD + WD+   F P+RFL S  D +G +F+LIPFGAGRRICPG+PLA RM+ +MLGSL+N+FDWK+D       +DM +K G T+ KA+PL  VP
Sbjct:  370 VELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDWKIDTKVPYDVLDMTEKNGTTISKAKPLCVVP 486          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.553e-34
Identity = 69/141 (48.94%), Postives = 89/141 (63.12%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNH----NMDMEDKFGLTVQKAQPLHAVP 643
            AV+KE                 +D +  G+ +PKG QV VN WAIGRD   WDNP  F PERFL S  D KGQN+ELIPFGAGRR+C GLPL  RM+H   GSL++ FDW+L ++    +++ME+  G+T +K QPL  +P
Sbjct:  324 AVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDNPFEFKPERFLESKVDVKGQNYELIPFGAGRRMCVGLPLGHRMMHFTFGSLLHEFDWELPHNVSPKSINMEESMGITARKKQPLKVIP 464          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.825e-30
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -2
Query:  233 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 565
            I  +T+PK  Q+ VN W IGRD  TW +P TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  369 ILNYTIPKDCQIMVNAWGIGRDPKTWTDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 483          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.113e-30
Identity = 60/115 (52.17%), Postives = 80/115 (69.57%), Query Frame = -2
Query:  233 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 565
            I  +T+PK  Q+ VN W IGRD  TW +P TF PERFL S+ DF+G +F LIPFGAGRRICPGLP+A + + L++ + + + DW L N     ++ +E+KFGLT+QK  PL  VP
Sbjct:  370 ILNYTIPKDCQIMVNAWGIGRDPKTWIDPLTFSPERFLNSSVDFRGNDFSLIPFGAGRRICPGLPIANQFIALLVATFVQNLDWCLPNGMSVDHLIVEEKFGLTLQKEPPLFIVP 484          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C76A2_SOLME (Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.935e-30
Identity = 64/141 (45.39%), Postives = 85/141 (60.28%), Query Frame = -2
Query:  233 AVVKEXXXXXXXXXXXXXXXXXKDVEIAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAQPLHAVP 643
            AV+KE                 +D +  G+ VPK  QV VN WAIGRD   WD+P +F PERFLGS  D KGQ++ LIPFGAGRR+C GLPL  RM+H  LGSL+  F+W+L +     +++M+   G+T +K   L  +P
Sbjct:  362 AVLKESLRLHPPLPFLIPRETIQDTKFMGYDVPKDTQVLVNAWAIGRDPECWDDPMSFKPERFLGSKIDVKGQHYGLIPFGAGRRMCVGLPLGHRMMHFALGSLLREFEWELPDGVSPKSINMDGSMGVTARKRDSLKVIP 502          
BLAST of CB304990 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.667e-29
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = -2
Query:  236 IAGFTVPKGAQVFVNVWAIGRDESTWDNPHTFIPERFLG---SNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDNHNMD--MEDKFGLTVQKAQPLHAV 565
            I G+ +PK  ++ VN+WAIGRD   W+NP  FIPERFL    +  + +G +FELIPFGAGRRIC G  + I M+  +LG+LI+SFDWKL N  +D  ME+ FGL +QKA PL A+
Sbjct:  383 IDGYYIPKNTRLSVNIWAIGRDPDVWENPLEFIPERFLSEKNAKIEHRGNDFELIPFGAGRRICAGTRMGIVMVEYILGTLIHSFDWKLPNDVVDINMEETFGLALQKAVPLEAI 497          
The following BLAST results are available for this feature:
BLAST of CB304990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
C76C2_ARATH1.067e-3855.32Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH3.434e-3754.61Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH1.305e-3651.77Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C3_ARATH3.214e-3559.32Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76B1_HELTU2.721e-3457.267-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76A1_SOLME3.553e-3448.94Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
C80B1_ESCCA1.825e-3052.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C80B2_ESCCA3.113e-3052.17(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C76A2_SOLME6.935e-3045.39Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76... [more]
C75A2_SOLME7.667e-2953.91Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IIaR_C08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IIaR_C08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304990 ID=CB304990; Name=CB304990; organism=Citrus sinensis; type=EST; length=644bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGCTATTAAATCGCATGA
CTTTATAGTTTATTGAAGATTAACTCCGTTAAGTTGCGTGTCTACATAAA
AAAAAATAAGAGCGCCCACACCTGAGAATGATTACACACACATATAACTA
ACCACCAAGCGCTTTATATAGTGGCTACCACCAAGCGCTTTATATATTGG
CTACGAACTATAGTATAGAACTAGATGGCACCAGGGACAGCATGAAGGGG
TTGAGCCTTCTGTACGGTGAGGCCAAATTTATCTTCCATGTCCATGTTGT
GGTTATCAAGCTTCCAATCAAAAGAGTTAATAAGTGAACCCAACATTAGA
TGTAACATTCTGATTGCCAATGGTAAACCAGGACAAATTCGTCGTCCAGC
TCCGAAGGGAATTAGCTCAAAATTCTGGCCTTTGAAATCAGCATTTGACC
CTAAGAACCTTTCGGGAATAAAAGTGTGAGGGTTGTCCCATGTGCTTTCA
TCTCTGCCAATAGCCCATACATTGACAAAAACTTGTGCACCTTTTGGCAC
TGTGAAGCCTGCAATTTCAACATCTTTTGTGGCTTTGCGGGGAAGTAATA
AGGGAGCTGCAGGGTGCAATCTCAAAGTTTCTTTAACAACAGCT
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