CB305084

Overview
NameCB305084
Unique NameCB305084
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12382 contig Csv1_Contig12382:857..1534. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G_PRUAV (Elongation factor 1-gamma OS=Prunus avium PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PS M+LDDWKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFC+YKYNDENTVSFVTLNKV GFLQRMDLARKYAFGKML+IG+EPPFKVKGLWLFRG EIP FVM+ECYDMELY+W K D+SDE QKERVNQ+IED EPFEGEALLDAKCFK
Sbjct:  271 PSNMVLDDWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMEECYDMELYNWTKVDLSDENQKERVNQVIEDQEPFEGEALLDAKCFK 422          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G1_ORYSJ (Elongation factor 1-gamma 1 OS=Oryza sativa subsp. japonica GN=Os02g0220600 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.586e-80
Identity = 137/152 (90.13%), Postives = 144/152 (94.74%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PSKMILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPPFKVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGEALLDAKCFK
Sbjct:  267 PSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGEALLDAKCFK 418          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G2_ORYSJ (Elongation factor 1-gamma 2 OS=Oryza sativa subsp. japonica GN=Os02g0220500 PE=2 SV=2)

HSP 1 Score: 296.59 bits (758), Expect = 7.989e-80
Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PSKMILD+WKRLYSNTK+NFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+EPPFKVKGLWLFRGPEIPKFVMDE YDMELY+W K DISDE QKERV+ MIED EPFEGE+LLDAKCFK
Sbjct:  267 PSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERVSAMIEDLEPFEGESLLDAKCFK 418          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G2_ARATH (Probable elongation factor 1-gamma 2 OS=Arabidopsis thaliana GN=At1g57720 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.179e-79
Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PS M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E PFKVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  262 PSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 413          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.179e-79
Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PS M+LDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDEN VSFVTLNKV GFLQRMDLARKY+FGKMLI G+E PFKVKGLWLFRGPEIPKF+MDE YDMELY+W K DISDE QKERV+QMIED EPFEGEALLDAKCFK
Sbjct:  263 PSPMVLDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENMVSFVTLNKVGGFLQRMDLARKYSFGKMLICGSEGPFKVKGLWLFRGPEIPKFIMDEVYDMELYEWTKVDISDEAQKERVSQMIEDAEPFEGEALLDAKCFK 414          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G3_ORYSJ (Elongation factor 1-gamma 3 OS=Oryza sativa subsp. japonica GN=Os06g0571400 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 4.384e-78
Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PSKMILD+WKRLYSNTK+NFRE+AIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVT+NKV GFLQRMDL RKYAFGKML+IG+ PPFKVKGLWLFRG +IPKFVMDE YDMELY+W K D+SDE QKERVN MIED EPFEGE LLDAKCFK
Sbjct:  265 PSKMILDEWKRLYSNTKTNFREIAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRKYAFGKMLVIGSTPPFKVKGLWLFRGQDIPKFVMDEVYDMELYEWTKVDLSDEAQKERVNAMIEDQEPFEGEDLLDAKCFK 416          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G_TRYCR (Elongation factor 1-gamma OS=Trypanosoma cruzi PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = -3
Query:  221 PSKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECYDMELYDWKK-ADISDEEQKERVNQMIEDHEPFEGEALLDAKCFK 676
            PS  +LD +KR YSNT +  R VA   F+  YD  GY+ ++C YKYN++N + F+T N + G+ QRM+  RKYAFG  LIIG E    +  LW+FRG  +P  ++++  D EL+DW++ AD++   Q+ER+   +    P     +L+ + FK
Sbjct:  264 PSPFVLDAFKREYSNTDT--RTVAAPYFFQHYDAAGYTTFWCRYKYNEDNKMQFMTANLIRGWFQRMEHVRKYAFGVALIIGEERRHDIVALWVFRGRGMPA-IVEDVEDTELFDWEEVADVA--AQRERITDYLSWEGPTIPRPVLEGRVFK 411          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G1_YEAST (Elongation factor 1-gamma 1 OS=Saccharomyces cerevisiae GN=CAM1 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.363e-23
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = -3
Query:  221 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPE-IPKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 673
            S  +LDDWKR YSN  +  R VA+  FW+ Y+PE YSLW   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG + +P F  D   D E YD+ K D ++++ KE +N M    +P     E + ++D K  K
Sbjct:  264 STFVLDDWKRKYSNEDT--RPVALPWFWEHYNPEEYSLWKVTYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDYVPAF--DVAPDWESYDYAKLDPTNDDDKEFINNMWAWDKPVSVNGEPKEIVDGKVLK 415          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G_CARAU (Elongation factor 1-gamma OS=Carassius auratus GN=eef1g PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23
Identity = 53/144 (36.81%), Postives = 89/144 (61.81%), Query Frame = -3
Query:  248 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEIPKFVMDECY--DMELYDWKKADISDEEQKERVNQMIEDHEPFEGE 673
            S  ++D++KR YSN  +    VA+  FWD +D EG+S+W+ +Y++ +E T+SF++ N ++G  QR+D  RK AF  +++ G      + G+W+FRG E+  F + E +  D E Y W+K D+  EE K     M++++  +EGE
Sbjct:  291 SSFVMDEFKRKYSNEDT--LTVALPYFWDHFDREGFSIWYAEYRFPEELTMSFMSCNLITGMFQRLDKLRKNAFASVILFGANNDSCISGIWVFRGQEL-AFTLSEDWQIDYESYTWRKLDVDSEECK----TMVKEYFAWEGE 427          
BLAST of CB305084 vs. ExPASy Swiss-Prot
Match: EF1G2_YEAST (Elongation factor 1-gamma 2 OS=Saccharomyces cerevisiae GN=TEF4 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.263e-23
Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = -3
Query:  221 SKMILDDWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVSGFLQRMDLARKYAFGKMLIIGNEPPFKVKGLWLFRGPEI-PKFVMDECYDMELYDWKKADISDEEQKERVNQMIEDHEPF----EGEALLDAKCFK 673
            S  +LDDWKR YSN  +  R VA+  FW+ Y+PE YS+W   YKYNDE T++F++ N V GF  R+  + KY FG +++ G      + G  + RG +  P F  D   D E Y++ K D + EE KE VN M    +P     E + ++D K  K
Sbjct:  261 STFVLDDWKRKYSNDDT--RPVALPWFWEHYNPEEYSIWKVGYKYNDELTLTFMSNNLVGGFFNRLSASTKYMFGCLVVYGENNNNGIVGAVMVRGQDFAPAF--DVAPDWESYEYTKLDPTKEEDKEFVNNMWAWDKPVVVNGEDKEIVDGKVLK 412          
The following BLAST results are available for this feature:
BLAST of CB305084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
EF1G_PRUAV3.586e-8088.82Elongation factor 1-gamma OS=Prunus avium PE=2 SV=... [more]
EF1G1_ORYSJ3.586e-8090.13Elongation factor 1-gamma 1 OS=Oryza sativa subsp.... [more]
EF1G2_ORYSJ7.989e-8089.47Elongation factor 1-gamma 2 OS=Oryza sativa subsp.... [more]
EF1G2_ARATH5.179e-7989.47Probable elongation factor 1-gamma 2 OS=Arabidopsi... [more]
EF1G1_ARATH5.179e-7989.47Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]
EF1G3_ORYSJ4.384e-7886.84Elongation factor 1-gamma 3 OS=Oryza sativa subsp.... [more]
EF1G_TRYCR1.480e-2540.52Elongation factor 1-gamma OS=Trypanosoma cruzi PE=... [more]
EF1G1_YEAST2.363e-2339.10Elongation factor 1-gamma 1 OS=Saccharomyces cerev... [more]
EF1G_CARAU4.030e-2336.81Elongation factor 1-gamma OS=Carassius auratus GN=... [more]
EF1G2_YEAST5.263e-2339.74Elongation factor 1-gamma 2 OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IVaR_H02 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IVaR_H02 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305084 ID=CB305084; Name=CB305084; organism=Citrus sinensis; type=EST; length=678bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGAACCATTGAAACTTGT
ATTAAAAAGATGTCCAAATCATCCTCAAAATTGCGACAAAATTATAAGTT
AATACTATAACACAAAATACTAGACTTCGATCTTTCTGAATTCGAAACAC
AAACAAACTCTACCAATAACCAAAGACAAACATGAACATCTTAAAACTAG
AAAAAAGATTAAGCTCATCACTTGAAGCACTTAGCATCCAAAAGAGCTTC
ACCCTCAAAAGGCTCGTGATCCTCGATCATCTGGTTCACACGTTCCTTTT
GCTCTTCGTCTGAGATGTCAGCCTTCTTCCAGTCATACAATTCCATGTCA
TAGCACTCATCCATGACGAATTTAGGAATTTCTGGGCCACGGAAGAGCCA
CAACCCCTTGACTTTGAATGGAGGCTCGTTGCCGATAATTAGCATCTTTC
CAAACGCATACTTGCGAGCCAGATCCATCCTCTGAAGAAACCCACTAACC
TTGTTCAAGGTCACGAATGACACAGTATTCTCGTCATTGTATTTGTAATC
ACAGAACCAAAGTGAGTAACCCTCAGGATCATACATGTCCCAGAATCCTT
TAATTGCAACTTCACGGAAGTTGGACTTCGTGTTTGAGTAAAGCCTCTTC
CAGTCATCCAGAATCATCTTACTTGGGG
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