CB305104

Overview
NameCB305104
Unique NameCB305104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2157 contig Csv1_Contig2157:62..589. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT5_ARATH (Cysteine proteinase inhibitor 5 OS=Arabidopsis thaliana GN=CYS5 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.280e-24
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = -3
Query:  182 FCCLIVLFLSVVPLLAAGDRKGALVGGWKPIEAPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPS-TKKFEAVVWEKPWEHFKSLPSFKP 514
            F  L+ L + ++PL A+     A VGGW PI    +  V+EIG+FAV+EYN +S+S LKFE+V  GETQVVSGTNYRL +   DG   +K + A+VW+KPW  F++L SF+P
Sbjct:    7 FLLLLSLVVVLLPLYASA---AARVGGWSPISNVTDPQVVEIGEFAVSEYNKRSESGLKFETVVSGETQVVSGTNYRLKVAANDGDGVSKNYLAIVWDKPWMKFRNLTSFEP 115          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT1_MAIZE (Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.054e-18
Identity = 45/98 (45.92%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  179 AAGDRKGALVGGWKPIEAPK-EKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKPM 469
            +  D  G L GG K + A + +  + E+ +FAV E+N ++ + L FE + K +TQVV+GT Y L + VKDG   K +EA VWEKPWE+FK L  FKP+
Sbjct:   32 SVADNAGMLAGGIKDVPANENDLQLQELARFAVNEHNQKANALLGFEKLVKAKTQVVAGTMYYLTIEVKDGEVKKLYEAKVWEKPWENFKQLQEFKPV 129          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT1_ORYSJ (Cysteine proteinase inhibitor 1 OS=Oryza sativa subsp. japonica GN=Os01g0803200 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 39/91 (42.86%), Postives = 61/91 (67.03%), Query Frame = -3
Query:  179 GALVGGWKPIEAPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKPM 451
            G ++GG +P+    + H++++ +FAVTE+N ++ S L+FE +   + QVV+GT Y   + VK+G + K +EA VWEKPW  FK L  FKP+
Sbjct:   44 GPVLGGVEPVGNENDLHLVDLARFAVTEHNKKANSLLEFEKLVSVKQQVVAGTLYYFTIEVKEGDAKKLYEAKVWEKPWMDFKELQEFKPV 134          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT8_ORYSJ (Cysteine proteinase inhibitor 8 OS=Oryza sativa subsp. japonica GN=Os03g0429000 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 6.369e-16
Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = -3
Query:  182 RFCCLIVLFLSVVPLLAA---GDR-KGALVGGWKPIEAPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLPSFKP 517
            R   L+ L L+V    AA   G+R  G LVGGW PI    + H+ E+G +AV  + + S   L+F  V  GE QVVSG NYRL++   D   +T  + AVV+E+ W + + L SFKP
Sbjct:    3 RIPLLLALLLAVSAAAAAQVGGNRGHGPLVGGWSPITDVGDPHIQELGGWAVERHASLSSDGLRFRRVTSGEQQVVSGMNYRLVVSASDPAGATASYVAVVYEQSWTNTRQLTSFKP 119          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = -3
Query:  179 LIVLFLSVVPLLAA--GDRKGALVGGWKPIEAPKEKHVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKD-GPSTKKFEAVVWEKPWEHFKSLPSFKPM 505
            LI L L ++PL++   G   G  +G  KPI+   +  V+ + ++A+ E+N +SK  L F  V +G TQVVSGT Y L +  KD G   K +EAVV EK W H KSL SFK +
Sbjct:    6 LICLSLILLPLVSVVEGLGGGGGLGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTKYDLKIAAKDGGGKIKNYEAVVVEKLWLHSKSLESFKAL 117          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT1_HORVU (Cysteine proteinase inhibitor OS=Hordeum vulgare GN=ICY PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.328e-13
Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = -3
Query:  182 KGALVGGWKPIEAPKEKHV--MEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKP 454
            +G L+GG +   A +E  +  +E+ +FAV E+N ++ + L+FE + K   QVV+G  +   + VK+G + K +EA VWEK WE+FK L  FKP
Sbjct:   13 RGVLLGGVQDAPAGRENDLETIELARFAVAEHNAKANALLEFEKLVKVRQQVVAGCMHYFTIEVKEGGAKKLYEAKVWEKAWENFKQLQEFKP 105          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT3_ARATH (Cysteine proteinase inhibitor 3 OS=Arabidopsis thaliana GN=CYS3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.958e-13
Identity = 37/91 (40.66%), Postives = 52/91 (57.14%), Query Frame = -3
Query:  185 KGALVGGWKPIEAPKEKHVME-IGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFK 454
            K  ++GG   +   +    +E + +FA+ E+N Q    L+F+ + K   QVV+GT Y L L  K+G  TK FEA VW KPW +FK L  FK
Sbjct:   31 KTMMLGGVHDLRGNQNSGEIESLARFAIQEHNKQQNKILEFKKIVKAREQVVAGTMYHLTLEAKEGDQTKNFEAKVWVKPWMNFKQLQEFK 121          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT6_ARATH (Cysteine proteinase inhibitor 6 OS=Arabidopsis thaliana GN=CYS6 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.124e-12
Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = -3
Query:  182 MNQRFCCLIVLF---LSVVPLLAAG----DRKGALVGGWKPIEAPKEKHVME-IGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFKP 526
            M  RF   IV F   L +  L+A+     + + ALVGG   + A +    +E + +FAV E+N +  + L+F  V K + QVV+GT + L L + +    K +EA VW KPW +FK L  FKP
Sbjct:    2 MRSRFLLFIVFFSLSLFISSLIASDLGFCNEEMALVGGVGDVPANQNSGEVESLARFAVDEHNKKENALLEFARVVKAKEQVVAGTLHHLTLEILEAGQKKLYEAKVWVKPWLNFKELQEFKP 124          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYTI_VIGUN (Cysteine proteinase inhibitor OS=Vigna unguiculata PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  185 ALVGGWKPIEAPKEK-HVMEIGQFAVTEYNNQSKSALKFESVEKGETQVVSGTNYRLILVVKDGPSTKKFEAVVWEKPWEHFKSLPSFK 448
            A +GG + +   +    +  + +FAV E+N +  + L+F  V   + QVVSGT Y + L  KDG   K +EA VWEKPW +FK L  FK
Sbjct:    2 AALGGNRDVAGNQNSLEIDSLARFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKKVYEAKVWEKPWLNFKELQEFK 90          
BLAST of CB305104 vs. ExPASy Swiss-Prot
Match: CYT6_ORYSJ (Cysteine proteinase inhibitor 6 OS=Oryza sativa subsp. japonica GN=Os03g0210200 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12
Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = -3
Query:  188 LLAAGDRKGALVGGWKPIEAPKEKHVMEIGQFAVTEYNNQSKS-ALKFESVEKGETQVVSGTNYRLILVVKDGPS--TKKFEAVVWEKPWEHFKSLPSF 475
            LLAA     AL  GW PI+   + H+ E+G++A+TE N  S S  L F  V  GE QVVSG NYRL +    G    T  + AVV+E+ W + + L SF
Sbjct:    9 LLAAVCAAAALPRGWSPIKNIDDPHIQELGRWAITENNRVSPSDELTFHRVTGGEQQVVSGMNYRLEIEAASGGGDVTGSYGAVVFEQEWSNTRKLISF 107          
The following BLAST results are available for this feature:
BLAST of CB305104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CYT5_ARATH1.280e-2450.89Cysteine proteinase inhibitor 5 OS=Arabidopsis tha... [more]
CYT1_MAIZE3.054e-1845.92Cystatin-1 OS=Zea mays GN=RAMDAZC7 PE=2 SV=1[more]
CYT1_ORYSJ5.760e-1742.86Cysteine proteinase inhibitor 1 OS=Oryza sativa su... [more]
CYT8_ORYSJ6.369e-1641.88Cysteine proteinase inhibitor 8 OS=Oryza sativa su... [more]
CYT4_ARATH4.128e-1543.75Cysteine proteinase inhibitor 4 OS=Arabidopsis tha... [more]
CYT1_HORVU1.328e-1340.86Cysteine proteinase inhibitor OS=Hordeum vulgare G... [more]
CYT3_ARATH2.958e-1340.66Cysteine proteinase inhibitor 3 OS=Arabidopsis tha... [more]
CYT6_ARATH1.124e-1237.40Cysteine proteinase inhibitor 6 OS=Arabidopsis tha... [more]
CYTI_VIGUN7.287e-1240.45Cysteine proteinase inhibitor OS=Vigna unguiculata... [more]
CYT6_ORYSJ7.287e-1243.43Cysteine proteinase inhibitor 6 OS=Oryza sativa su... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_C01 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_C01 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305104 ID=CB305104; Name=CB305104; organism=Citrus sinensis; type=EST; length=528bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGAAAAGAAAATGGAAAATC
GAAATCTGAAAGACTCACCTTTGACATTCATAAACAATATAATAATATCA
TCACTCACATAACGAAAACCTTAATAATTATCAATCTGAGATTACATGCA
TTGGTATTTGTTAAACACCCTATTTAACCATAGGCTTAAACGAGGGGAGA
CTCTTGAAATGCTCCCATGGCTTCTCCCAAACGACAGCTTCAAATTTCTT
GGTCGAAGGGCCGTCCTTGACGACCAAGATCAGCCGGTAATTGGTGCCGG
AAACCACCTGAGTCTCGCCCTTCTCCACGCTCTCGAACTTCAACGCGCTC
TTTGACTGGTTGTTGTACTCCGTCACCGCGAACTGCCCGATCTCCATCAC
GTGCTTCTCCTTGGGGGCCTCTATCGGCTTCCATCCCCCAACCAACGCTC
CTTTACGGTCGCCGGCGGCCAGGAGAGGGACCACGGAGAGAAAGAGAACA
ATAAGACAGCAAAAACGTTGATTCATTT
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