CB305118

Overview
NameCB305118
Unique NameCB305118
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB305118 vs. ExPASy Swiss-Prot
Match: GALT_ARATH (Probable galactose-1-phosphate uridyl transferase OS=Arabidopsis thaliana GN=At5g18200 PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 4.907e-66
Identity = 110/163 (67.48%), Postives = 142/163 (87.12%), Query Frame = -3
Query:   94 QLLALPVIPPTISARITSTKEYFDQSGKCCLCEVQPKALQIDVTTYFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNPPFNIMIQTAPLQAIDTQLAYIHWFLQIVPQLAGVGGFEIGTGCYINPVFSEDAAKVMQEVNV 582
            Q++ALPV+PPT+S+R+  TK+YF+++GKCCLCE + K   ID +++F+S+ PFAAT+PFEIWIIP++HSSHFH LD+ KAVDLGGLLKL L+KI+ QLN+PP+N MI T+PL+  ++QL Y HWFLQIVPQL+GVGGFEIGTGCYINPVF ED AKVM+EV++
Sbjct:  188 QMMALPVVPPTVSSRLDGTKDYFEETGKCCLCEAKSKHFVIDESSHFVSVAPFAATYPFEIWIIPKDHSSHFHHLDDVKAVDLGGLLKLMLQKIAKQLNDPPYNYMIHTSPLKVTESQLPYTHWFLQIVPQLSGVGGFEIGTGCYINPVFPEDVAKVMREVSL 350          
BLAST of CB305118 vs. ExPASy Swiss-Prot
Match: GAL7_THEMA (Galactose-1-phosphate uridylyltransferase OS=Thermotoga maritima GN=galT PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.566e-16
Identity = 49/173 (28.32%), Postives = 89/173 (51.45%), Query Frame = -3
Query:   94 QLLALPVIPPTISARITSTKEYFDQSGKCCLCEV---QPKALQIDVTTYFISIVPFAATFPFEIWIIPRNHSSHFHELDNEKAVDLGGLLKLTLRKISVQLNNP-PFNIMIQTAPLQAIDTQLAYIHWFLQIVP------QLAGVGGFEIGTGCYINPVFSEDAAKVMQEVNV 582
            Q+ A P +P  I  +I + ++++++  KC +CEV   + +  ++  T +F+++VPF A FP+E+ I P+ H S   E   E+  +   +LK+   K     +   P+ +M   AP    D    + H+ ++  P      +L  +   E GT  +INPV  E+AA+ ++E  V
Sbjct:  145 QIYAFPFLPKRIEVKIGAMRKWYEEKRKCPICEVLESEGEERKVYETEHFLALVPFYARFPYEVHIYPKRHVSTLLEFSKEEKKEFAKVLKVVTAKYDKLFDQEFPYMMMFFQAPFNEEDVS-HFFHFHVEFNPPKRDRDKLKWMASVETGTWAFINPVVPEEAARQLRETEV 316          
The following BLAST results are available for this feature:
BLAST of CB305118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GALT_ARATH4.907e-6667.48Probable galactose-1-phosphate uridyl transferase ... [more]
GAL7_THEMA3.566e-1628.32Galactose-1-phosphate uridylyltransferase OS=Therm... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_D08 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_D08 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305118 ID=CB305118; Name=CB305118; organism=Citrus sinensis; type=EST; length=584bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCACTTGAAACTATGATTTTT
TTTATTTCCAGTATTAATTAGAATTTGTGCATGCCTACTTTGGAACATTA
ACTTCCTGCATAACTTTAGCAGCATCCTCAGAGAAAACAGGATTTATGTA
ACAACCTGTACCGATTTCGAAACCCCCAACACCGGCTAATTGAGGTACGA
TTTGTAAAAACCAGTGTATATAGGCTAACTGAGTATCAATGGCTTGAAGT
GGAGCTGTCTGGATCATGATATTGAAAGGCGGGTTATTCAATTGCACAGA
AATCTTTCTAAGCGTGAGTTTCAGCAAACCCCCGAGATCAACAGCCTTCT
CGTTATCTAGCTCATGGAAATGAGAAGAGTGATTTCGGGGAATAATCCAT
ATCTCAAAAGGAAATGTGGCAGCAAAAGGAACAATGGAAATAAAATATGT
AGTAACATCTATTTGAAGGGCCTTGGGTTGAACTTCACAAAGACAGCATT
TTCCACTCTGATCGAAATATTCCTTCGTACTGGTAATTCTTGCAGAGATG
GTGGGTGGAATGACTGGAAGTGCCAGTAATTGAC
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