CB305125

Overview
NameCB305125
Unique NameCB305125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2641 contig Csv1_Contig2641:331..957. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.770e-19
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = -1
Query:  450 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 626
            CDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:    8 CDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.149e-16
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = -1
Query:  447 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 626
            CDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    7 CDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.321e-14
Identity = 38/58 (65.52%), Postives = 43/58 (74.14%), Query Frame = -1
Query:  453 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 626
            CDCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    8 CDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = -1
Query:  453 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 626
            CDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    8 CDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.564e-14
Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = -1
Query:  450 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 626
            CDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    8 CDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = -1
Query:  450 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 626
            CDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    8 CDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CB305125 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.367e-11
Identity = 30/59 (50.85%), Postives = 37/59 (62.71%), Query Frame = -1
Query:  450 CDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 626
            CDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    8 CDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
The following BLAST results are available for this feature:
BLAST of CB305125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT3_CARPA6.770e-1966.10Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC9.149e-1658.33Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE1.321e-1465.52Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV8.564e-1458.62Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO8.564e-1459.32Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.367e-1150.85Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.367e-1150.85Metallothionein-like protein 3A OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionFLAVEDO0003_IaR_E09 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0003_IaR_E09 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB305125 ID=CB305125; Name=CB305125; organism=Citrus sinensis; type=EST; length=626bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTACAAATTTGGTACTATA
TATGTTGATGTTCAAGGGTATGAATCCTTATGTGCATACTACAGCATGTT
AATAAATTTCTCCTCCCACCTTCGAGACTGGAAGAAAAATAGGGGATGAG
AAAGATAGGGAGAGTTGGCTGTAGACTAACAATAATACATTAAAATTAAA
CCACACAAGGCCACGGTCATGGCCATGGCCATATATTACATGATTATGAA
GAAGGAAACACAAAACATTACGAGTGATGGGTGACACAACACGCACATCA
CTCCACACACTAGTAGTAGACCATCATAAAAACGAAGTAGAGAATTTTTC
TTTTTTTTTAATCACCCTTACATTATTCTTAACCCCCACAATATTTAGGC
ACACTTGCAGCTTCTATTTTTTGCTGCATGTGTTTGCTTATTAGTGACTA
CCACAAGTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTGCAGTTACC
TTCAGTCTCAGCAGCCTGAACGTCCATGACAACAACGGTGCTGACAAAGC
TCAAGTCAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCTTCTTCACA
CACTGGCTCCTGTCAGCGCAGTCGCA
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