CB322099

Overview
NameCB322099
Unique NameCB322099
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length337
Libraries
Library NameType
Mature leaf blade cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13040 contig Csv1_Contig13040:179..515. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC1_SOLTU (Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 4.963e-47
Identity = 93/111 (83.78%), Postives = 99/111 (89.19%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRAAVKIPVVSENEGGN 335
            SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA+STPYLGG+LLVIVLAWLGAA+SLD QFT LRQ         RA++KIPVVS+NE GN
Sbjct:  492 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVVSQNENGN 602          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC1_ARATH (ADP,ATP carrier protein 1, chloroplastic OS=Arabidopsis thaliana GN=AATP1 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.279e-42
Identity = 88/112 (78.57%), Postives = 95/112 (84.82%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGN 335
            SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMIL+FGSLANSTPYLG ILLVIV AWL AA+SL+ QF +LR          RA +VKIPVVS++E GN
Sbjct:  494 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPVVSQDESGN 605          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC2_ARATH (ADP,ATP carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 6.497e-39
Identity = 84/109 (77.06%), Postives = 89/109 (81.65%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENE 326
            SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLG ILL IV AWL AA+SL+ QF  L           RA +VKIPVVS+ +
Sbjct:  491 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELEREMERASSVKIPVVSQED 599          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC1_CHLPN (ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae GN=tlcA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 251
            +LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGGALIQQ +++  GS+   TPYL  ILL I+  WL +A  L+  F A
Sbjct:  414 ALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGALIQQGLLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLA 496          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC1_CHLMU (ADP,ATP carrier protein 1 OS=Chlamydia muridarum GN=tlcA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.173e-18
Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 251
            +LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS++  TP+L   L  I++ WL +A  L+  F A
Sbjct:  412 ALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLC1_CHLTR (ADP,ATP carrier protein 1 OS=Chlamydia trachomatis GN=tlcA PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.838e-18
Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 251
            +LFD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS+   TP+L   L  I++ WL +A  L+  F A
Sbjct:  412 ALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCA_RICBR (ADP,ATP carrier protein 1 OS=Rickettsia bellii (strain RML369-C) GN=tlcA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.009e-15
Identity = 40/86 (46.51%), Postives = 56/86 (65.12%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSL--ANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 254
            SLFD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +L    +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  407 SLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFIIFPALGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCA_RICTY (ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=tlcA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.318e-15
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA--NSTPYLGGILLVIVLAWLGAARSLDTQFTAL 254
            SLFD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ    + F +     +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  407 SLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPAFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCA_RICPR (ADP,ATP carrier protein 1 OS=Rickettsia prowazekii GN=tlcA PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 254
            SLFD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ   F++        +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  407 SLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of CB322099 vs. ExPASy Swiss-Prot
Match: TLCA_RICFE (ADP,ATP carrier protein 1 OS=Rickettsia felis GN=tlcA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.937e-15
Identity = 39/86 (45.35%), Postives = 55/86 (63.95%), Query Frame = 3
Query:    3 SLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 254
            SLFD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  407 SLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
The following BLAST results are available for this feature:
BLAST of CB322099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
TLC1_SOLTU4.963e-4783.78Plastidic ATP/ADP-transporter OS=Solanum tuberosum... [more]
TLC1_ARATH6.279e-4278.57ADP,ATP carrier protein 1, chloroplastic OS=Arabid... [more]
TLC2_ARATH6.497e-3977.06ADP,ATP carrier protein 2, chloroplastic OS=Arabid... [more]
TLC1_CHLPN2.567e-1959.04ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae ... [more]
TLC1_CHLMU2.173e-1854.22ADP,ATP carrier protein 1 OS=Chlamydia muridarum G... [more]
TLC1_CHLTR2.838e-1854.22ADP,ATP carrier protein 1 OS=Chlamydia trachomatis... [more]
TLCA_RICBR1.009e-1546.51ADP,ATP carrier protein 1 OS=Rickettsia bellii (st... [more]
TLCA_RICTY1.318e-1545.35ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=t... [more]
TLCA_RICPR1.722e-1545.35ADP,ATP carrier protein 1 OS=Rickettsia prowazekii... [more]
TLCA_RICFE2.937e-1545.35ADP,ATP carrier protein 1 OS=Rickettsia felis GN=t... [more]

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Properties
Property NameValue
Genbank descriptionEST0208 Mature leaf blade cDNA subtraction library Citrus sinensis cDNA clone 24LB024 similar to plastidic ADP/ATP transporter (acc# AAM29152), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB322099 ID=CB322099; Name=CB322099; organism=Citrus sinensis; type=EST; length=337bp
ACAGCTTGTTTGATCCTTGCAAAGAAATGGCCTACATTCCATTAGATGAA
GACACCAAGGTTAAAGGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTT
GGGGAAATCTGGAGGAGCTCTTATTCAGCAGTTTATGATATTAACCTTTG
GGTCCCTTGCGAATTCAACTCCTTATCTTGGGGGGATACTTTTGGTGATT
GTTCTTGCATGGTTAGGAGCAGCCAGGTCTTTAGATACCCAATTTACAGC
TTTGCGTCAGGAAGAAGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTA
AGATCCCAGTTGTCTCTGAAAATGAAGGCGGGAATGG
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