CB417310
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.838e-28 Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 1 Query: 4 SLR-RSASRWNTNSIGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 SLR S S W N + F ALKWAALEKLPT++RLRKG+L S+G A EVD+ +LG QER+ L+++LVKV D DNE+FLLKLKNRIDRVGIDLP +E Sbjct: 21 SLRANSNSIWRNNGVEIFSRSSRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGAAAEVDINDLGFQERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDLPTIE 127
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.200e-26 Identity = 61/107 (57.01%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 4 SLRRSASRWNTNSIG-AFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 SLRRS S W + S F ALKWAALEKLPTY+RLRKGI+T GE EVD+ LG QER+ L++KLV+ + DNERFLLKL+NR++RVGID P +E Sbjct: 18 SLRRSVSAWRSPSTSDVFGRSSREEDDEEALKWAALEKLPTYDRLRKGIMTGDGGEIQEVDIQGLGFQERKNLLEKLVRNAEEDNERFLLKLRNRMERVGIDNPTIE 124
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.200e-26 Identity = 61/102 (59.80%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 16 SASRWNTNSIGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 S S W N F ALKWAALEKLPTY+RLRKGIL S+G A EVDV + G+ ER+ L+++LVKV D DNE+FLLKLKNRIDRVGID P +E Sbjct: 30 SNSIWRNNGAEVFSRSARDEDDEEALKWAALEKLPTYDRLRKGILFGSQGAAAEVDVDDSGVLERKNLLERLVKVADEDNEKFLLKLKNRIDRVGIDFPSIE 131
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.587e-24 Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 1 Query: 4 SLRRSASRWNTNS--IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 S+RR+AS W S AF ALKWAA+EKLPTY+R+RKGILT G EVD+ LGLQER+ LI++LV+ + DNERFLLKL++R++RVGID P +E Sbjct: 15 SVRRTASSWRGTSGRSDAFGRSVREEDDEEALKWAAIEKLPTYDRMRKGILTA--GGVEEVDIGGLGLQERRNLIERLVRTAEEDNERFLLKLRDRMERVGIDNPTIE 120
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.927e-22 Identity = 55/109 (50.46%), Postives = 75/109 (68.81%), Query Frame = 1 Query: 4 SLRRSASRWNTNS-IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSR--GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 S+RR++S W +S F AL+WAALEKLPT++RLRKGILT S G NE+D+ LG Q+ ++L+++L+KV D ++E+ L KLK RIDRVGIDLP +E Sbjct: 12 SMRRNSSVWKKDSGREIFSRSSREEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPINEIDIQKLGFQDTKKLLERLIKVGDDEHEKLLWKLKKRIDRVGIDLPTIE 120
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.854e-20 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 1 TSLRRSASRWNTNSIGAFXXXXXXXXXXX------ALKWAALEKLPTYNRLRKGILTTSR-----GEANE--VDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 +S R +AS W + G F AL+WAALEKLPTY+R+R+ +L GEA + VDV +LG QER+ L+++LV+V + DNERFLLKLK RIDRVGID+P +E Sbjct: 20 SSSRGAASMWWSADNGVFSRSRASSSGEDGEDDEEALRWAALEKLPTYDRVRRAVLPVVEEGGGGGEAGKKVVDVLSLGPQERRALLERLVRVAEDDNERFLLKLKERIDRVGIDIPTIE 139
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.527e-19 Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 1 Query: 4 SLRRSASRWNTNS---IGAFXXXXXXXXXXXALKWAALEKLPTYNRLRKGILTTSR------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 SLRR S W + + AL+WAALE+LPTY+R+R+GIL S GE EVDV LG +E + LI++LV+ D D+ERFLLKL+ R+DRVGID P +E Sbjct: 10 SLRREGSMWRSGGDVFSRSSSRFQDEDDDEEALRWAALERLPTYDRVRRGILAVSSEDGGAGGEKVEVDVGRLGARESRALIERLVRAADDDHERFLLKLRERMDRVGIDYPTIE 124
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.994e-19 Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSRGEANE-----------VDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 AL+WAAL+KLPTY+R+R IL GE E VDV++LG ER+ L+++LV+V D DNERFLLKLK RI RVGID+P +E Sbjct: 56 ALRWAALQKLPTYDRVRAAILPMVEGEGGEAGGGGGGRRVVVDVHSLGPHERRALLERLVRVADDDNERFLLKLKERISRVGIDMPTIE 144
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19 Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSR-------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 AL+WAALEKLPTY+R+R+ IL G VDV+ LG +ER+ L+++LV+V D DNE+FLLKLK+R+DRVGID+P +E Sbjct: 46 ALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIE 130
BLAST of CB417310 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.605e-19 Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 88 ALKWAALEKLPTYNRLRKGILTTSR-------GEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVE 321 AL+WAALEKLPTY+R+R+ IL G VDV+ LG +ER+ L+++LV+V D DNE+FLLKLK+R+DRVGID+P +E Sbjct: 46 ALRWAALEKLPTYDRVRRAILPLGGDDGAGDGGGKGVVDVHGLGPRERRALLERLVRVADEDNEKFLLKLKDRVDRVGIDMPTIE 130 The following BLAST results are available for this feature:
BLAST of CB417310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CB417310 ID=CB417310; Name=CB417310; organism=Citrus sinensis; type=EST; length=322bpback to top |