CF417075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_ARATH (T-complex protein 1 subunit epsilon OS=Arabidopsis thaliana GN=At1g24510 PE=2 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.622e-107 Identity = 104/117 (88.89%), Postives = 113/117 (96.58%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGG+LEDTELIYGI +DKDMSHPQMPK+IE+A IAILTCPFEPPKPKTKHKVDIDTVEKF+TLR+QEQ+YFD+MVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGG + Sbjct: 210 KVGGKLEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFETLRKQEQQYFDEMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVEL 326 HSP 2 Score: 183.341 bits (464), Expect = 1.622e-107 Identity = 90/97 (92.78%), Postives = 95/97 (97.94%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 GVELELIAIATGGRIVPRFQELTPEKLGKAG+VREKSFGTT++RMLYIEHCANS+AVT+FIRGGNKMMIEETKRSIHDALCVARNLIRN SIVYG G Sbjct: 323 GVELELIAIATGGRIVPRFQELTPEKLGKAGVVREKSFGTTKERMLYIEHCANSKAVTVFIRGGNKMMIEETKRSIHDALCVARNLIRNKSIVYGGG 419
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.631e-104 Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGG+LEDTEL+ GI VDKDMSHPQMPKRIE+A IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGG + Sbjct: 210 KVGGKLEDTELVQGIIVDKDMSHPQMPKRIEDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVEL 326 HSP 2 Score: 177.563 bits (449), Expect = 3.631e-104 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 GVELELIAIATGGRIVPRFQEL+ EKLGKAGLVREKSFGTT+DRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYG G Sbjct: 323 GVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGG 419
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.049e-103 Identity = 103/117 (88.03%), Postives = 108/117 (92.31%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGG+LEDTEL+ GI VDKDMSHPQMPKRI +A IAILTCPFEPPKPKTKHKVDIDTVEKFQTLR QEQKYFD+MVQKCKDVGATLVICQWGFDDEANHLLM R LPAVRWVGG + Sbjct: 210 KVGGKLEDTELVEGIIVDKDMSHPQMPKRIYDAHIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRGQEQKYFDEMVQKCKDVGATLVICQWGFDDEANHLLMQRELPAVRWVGGVEL 326 HSP 2 Score: 177.563 bits (449), Expect = 3.049e-103 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 GVELELIAIATGGRIVPRFQEL+ EKLGKAGLVREKSFGTT+DRMLYIE CANS+AVTIFIRGGNKMMIEETKRSIHDALCVARNLI NNSIVYG G Sbjct: 323 GVELELIAIATGGRIVPRFQELSTEKLGKAGLVREKSFGTTKDRMLYIEKCANSKAVTIFIRGGNKMMIEETKRSIHDALCVARNLIINNSIVYGGG 419
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.084e-85 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGGRLEDT+LI G+ VDKD SHPQMPK++E+AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L++ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG I Sbjct: 214 KVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEI 330 HSP 2 Score: 154.451 bits (389), Expect = 1.084e-85 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYG G Sbjct: 327 GPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 423
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.084e-85 Identity = 81/117 (69.23%), Postives = 101/117 (86.32%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGGRLEDT+LI G+ VDKD SHPQMPK++E+AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L++ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG I Sbjct: 214 KVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEI 330 HSP 2 Score: 154.451 bits (389), Expect = 1.084e-85 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYG G Sbjct: 327 GPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 423
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.137e-85 Identity = 80/117 (68.38%), Postives = 101/117 (86.32%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGGRLEDT+LI G+ VDKD SHP+MPK++E+AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L++ E++ F++M+Q+ K+ GA L ICQWGFDDEANHLL+ NLPAVRWVGG I Sbjct: 214 KVGGRLEDTKLIKGVIVDKDFSHPRMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEI 330 HSP 2 Score: 154.451 bits (389), Expect = 3.137e-85 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIATGGRIVPRF ELT EKLG AGLV+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYG G Sbjct: 327 GPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 423
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.612e-84 Identity = 79/117 (67.52%), Postives = 97/117 (82.91%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGGRLEDT+LI G+ VDKD SHPQMPK + NAKIAILTCPFEPPKPKTKHK+D+ +VE ++ L++ E++ F++M+ + K+ GA L ICQWGFDDEANHLL+ LPAVRWVGG I Sbjct: 214 KVGGRLEDTKLIKGVIVDKDFSHPQMPKEVLNAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIAQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEI 330 HSP 2 Score: 154.836 bits (390), Expect = 7.612e-84 Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIATGGRIVPRF ELT EKLG AG+VRE SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYG G Sbjct: 327 GPEIELIAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 423
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 4.891e-83 Identity = 78/117 (66.67%), Postives = 99/117 (84.62%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGGRLEDT+LI G+ VDKD SHPQMPK++ +AKIAILTCPFEPPKPKTKHK+D+ +VE ++ L++ E++ F++M+++ K+ GA L ICQWGFDDEANHLL+ LPAVRWVGG I Sbjct: 214 KVGGRLEDTKLIKGVIVDKDFSHPQMPKKVVDAKIAILTCPFEPPKPKTKHKLDVMSVEDYKALQKYEKEKFEEMIKQIKETGANLAICQWGFDDEANHLLLQNGLPAVRWVGGPEI 330 HSP 2 Score: 152.91 bits (385), Expect = 4.891e-83 Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIATGGRIVPRF ELT EKLG AG+V+E SFGTT+D+ML IE C NSRAVTIFIRGGNKM+IEE KRS+HDALCV RNLIR+N +VYG G Sbjct: 327 GPEIELIAIATGGRIVPRFSELTSEKLGFAGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGG 423
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.085e-82 Identity = 82/117 (70.09%), Postives = 98/117 (83.76%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGCRI 353 KVGG ++DT+L+ G+ VDKDMSHPQMP RIENAKIAILTCPFEPPKPKTKHK+DI +V +F+ L+ E++ F +M++ KD GA LVICQWGFDDEANHLL+ NLPAVRWVGG I Sbjct: 216 KVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEI 332 HSP 2 Score: 145.976 bits (367), Expect = 1.085e-82 Identity = 67/97 (69.07%), Postives = 85/97 (87.63%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G E+ELIAIAT GRIVPRF++L+ +KLG AG+VRE SFGTT+D++L IE CANSRAVT+F+RG NKM+++E KR++HDALCV RNLIR+N +VYG G Sbjct: 329 GPEIELIAIATNGRIVPRFEDLSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGG 425
BLAST of CF417075 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 6.974e-79 Identity = 78/114 (68.42%), Postives = 93/114 (81.58%), Query Frame = 3 Query: 3 KVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGG 344 K GG+LEDT+L+ GI +DK +SHPQMPK I++AKI +LTCPFEPPKPKTK+ ++I E F+ L + EQKYF DMV+K K GA LVICQWGFDDEANHLL+ NLPAVRWVGG Sbjct: 210 KEGGKLEDTQLVKGIIIDKGISHPQMPKIIKDAKICLLTCPFEPPKPKTKNSIEITKAEDFKVLGEIEQKYFTDMVEKVKATGANLVICQWGFDDEANHLLLQNNLPAVRWVGG 323 HSP 2 Score: 143.28 bits (360), Expect = 6.974e-79 Identity = 67/97 (69.07%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 343 GVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGRG 633 G++LE IA+ATGGRIV RF++++ +KLG+AGLVRE FGTTQDR L IE C N+ AVTIF+RGGNKM++EE KRSIHDALCV RNLIR+N ++YG G Sbjct: 323 GLDLEKIAMATGGRIVARFEDVSADKLGRAGLVREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGG 419 The following BLAST results are available for this feature:
BLAST of CF417075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417075 ID=CF417075; Name=CF417075; organism=Citrus sinensis; type=EST; length=639bpback to top |