CF417082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_AEDAE (Cytochrome c oxidase subunit 3 OS=Aedes aegypti GN=mt:CoIII PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 1.457e-13 Identity = 43/158 (27.22%), Postives = 58/158 (36.71%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXX--FRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE TFQG HT P E+G++ PP+ I+ F SG++VT AH + NN QT + + Y ++ F FFV TGFHG+HV+IGT+F Sbjct: 61 DISREGTFQGLHTIPVTLGLRWGMILFIISEVFFFISFFWAFFHSSLSPTIELGMVWPPIGIEPFNPFQIPLLNTAILLASGVTVTWAHHSLMENNHTQTIQSLFFTVLLGIYFSILQAYEYIE---APFTIADNVYGSTFFVATGFHGLHVLIGTSF 215 HSP 2 Score: 36.965 bits (84), Expect = 1.457e-13 Identity = 17/38 (44.74%), Postives = 20/38 (52.63%), Query Frame = 2 Query: 569 LLLELHFLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 +L+ FL L R HFS HH G E + YWHFV Sbjct: 209 VLIGTSFLLICLFRHMNCHFSSSHHFGFEAAAWYWHFV 246
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_PELSU (Cytochrome c oxidase subunit 3 OS=Pelomedusa subrufa GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 2.586e-12 Identity = 43/156 (27.56%), Postives = 52/156 (33.33%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE TFQG+HT P E+G I PP I SG+++T AH + N QT + F M F FFV TGFHG+HVIIG+TF Sbjct: 60 DIVRESTFQGHHTPSVQNNLRYGMILFITSEILFFTGFFWAFYHSSLSPTAELGNIWPPTGITPLNPFEVPLLNTAVLLASGVTITWAHHSLMEGNRPQT-LQALTLTIILGTYFTILQAMEYFEASFTIADSIYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 36.5798 bits (83), Expect = 2.586e-12 Identity = 16/32 (50.00%), Postives = 18/32 (56.25%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FL LMR HF+ HH G E + YWHFV Sbjct: 214 FLIVCLMRQLKYHFTSHHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_APILI (Cytochrome c oxidase subunit 3 OS=Apis mellifera ligustica GN=COIII PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 2.587e-12 Identity = 41/156 (26.28%), Postives = 54/156 (34.62%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE TFQG H+ PN EI + PP NIK F SG +VT +H + NN ++ +K F + F FF+ TGFHG+HV+IG+ F Sbjct: 59 DIIRESTFQGMHSMFITNFLKFSMILFILSELMFFISFFWTFFHSSISPNIEINMTWPPKNIKFFNPMEIPLLNSFILVSSGFTVTLSHYYLIINN-LKLSKSYLLLTILLGIYFTILQTIEYSNSFFCFNDSIYGSIFFMATGFHGLHVLIGSIF 213 HSP 2 Score: 37.7354 bits (86), Expect = 2.587e-12 Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FL L R+ IHFS H++ E++I YWHFV Sbjct: 213 FLLISLYRMMNIHFSNMHNMNFELAIWYWHFV 244
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_LOCMI (Cytochrome c oxidase subunit 3 OS=Locusta migratoria GN=COIII PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 5.661e-12 Identity = 43/156 (27.56%), Postives = 53/156 (33.97%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 D+ RE TFQG HTK P E+G+ PP+ I+ F SG+++T AH I N Q + F F FFV TGFHG+HVIIGTTF Sbjct: 62 DVVREGTFQGLHTKLVSKGLRWGMILFIASEVLFFASFFWAFFNSSLAPTIELGMKWPPMGIQPFNPIQIPLLNTAILLASGVTITWAHHSIMECNHSQA-LQGLFFTVMLGFYFTLLQMYEYWEAPFTIADAVYGSTFFVATGFHGLHVIIGTTF 216 HSP 2 Score: 34.6538 bits (78), Expect = 5.661e-12 Identity = 15/32 (46.88%), Postives = 18/32 (56.25%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FL L+R + FS HH G E + YWHFV Sbjct: 216 FLLTCLIRHMMNQFSSNHHFGFEAAAWYWHFV 247
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_ORNAN (Cytochrome c oxidase subunit 3 OS=Ornithorhynchus anatinus GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 5.663e-12 Identity = 43/156 (27.56%), Postives = 51/156 (32.69%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE T+QG+HTK P E+G PP I SG+S+T AH + N Q + F M F FFV TGFHG+HVIIGTTF Sbjct: 60 DIVREGTYQGHHTKIVQKGLRYGMILFIISEVFFFLGFFWAFYHSSLAPTPELGGCWPPTGISPLNPLEVPLLNTSILLASGVSITWAHHSLMEGNRKQM-LQALTITIALGLYFTALQAMEYYEASFTISDGVYGSTFFVATGFHGLHVIIGTTF 214 HSP 2 Score: 38.1206 bits (87), Expect = 5.663e-12 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FL L+R + HF+ HH G E + YWHFV Sbjct: 214 FLITCLVRQTLYHFTSNHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_PETMA (Cytochrome c oxidase subunit 3 OS=Petromyzon marinus GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 7.354e-12 Identity = 43/156 (27.56%), Postives = 50/156 (32.05%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE TF G+HT P E+GL PP I SG+SVT AH I N +T + F M F FFV TGFHG+HVIIG+ F Sbjct: 60 DIVREGTFLGHHTSPVQQGLRYGMILFIISEVCFFAGFFWAFYHASLAPTPELGLTWPPTGINPLNPFEVPLLNTAVLLASGVSVTWAHHSITEKNRTETTQALTLTVLLGLY-FTALQIMEYYETPFTMADGVYGSTFFVATGFHGLHVIIGSLF 214 HSP 2 Score: 37.7354 bits (86), Expect = 7.354e-12 Identity = 16/32 (50.00%), Postives = 19/32 (59.38%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FL L+R HF+ KHH G E + YWHFV Sbjct: 214 FLLTCLLRHLQYHFTSKHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_COTJA (Cytochrome c oxidase subunit 3 OS=Coturnix coturnix japonica GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 9.549e-12 Identity = 42/156 (26.92%), Postives = 51/156 (32.69%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 D+ RE TFQG+HT P E+G PP IK SG++VT AH I N Q F M F+ FFV TGFHG+HVIIG++F Sbjct: 60 DVVRESTFQGHHTPTVQKGLRYGMILFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPTGIKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAI-HALTLTILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSF 214 HSP 2 Score: 40.0466 bits (92), Expect = 9.549e-12 Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FLT L+RL HF+ HH G E + YWHFV Sbjct: 214 FLTICLLRLIKFHFTSNHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_STRCA (Cytochrome c oxidase subunit 3 OS=Struthio camelus GN=MT-CO3 PE=3 SV=2) HSP 1 Score: 48.521 bits (114), Expect = 9.549e-12 Identity = 42/160 (26.25%), Postives = 54/160 (33.75%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFY----NFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 DI RE TFQG+HT P E+G PP I SG++VT AH I ++N++ FY M F+ FFV TGFHG+HVIIG++F Sbjct: 60 DIVRESTFQGHHTPTVQKGLRYGMILFITSEAFFFLGFFWAFFHSSLAPTPELGAQWPPTGINPLNPLEVPLLNTAILLASGVTVTWAHHSIT-----ESNRKQAIHALSLTIILGFYFTALQAMEYHEASFSIADGVYGSTFFVATGFHGLHVIIGSSF 214 HSP 2 Score: 40.4318 bits (93), Expect = 9.549e-12 Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FLT L+RL HF+ HH G E + YWHFV Sbjct: 214 FLTVCLLRLIKFHFTTNHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_CHICK (Cytochrome c oxidase subunit 3 OS=Gallus gallus GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 1.240e-11 Identity = 41/156 (26.28%), Postives = 51/156 (32.69%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 D+ RE TFQG+HT P E+G PP +K SG++VT AH I N Q F M F+ FFV TGFHG+HVIIG++F Sbjct: 60 DVVRESTFQGHHTPTVQKGLRYGMILFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAI-HALTLTILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSF 214 HSP 2 Score: 40.0466 bits (92), Expect = 1.240e-11 Identity = 17/32 (53.12%), Postives = 20/32 (62.50%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FLT L+RL HF+ HH G E + YWHFV Sbjct: 214 FLTVCLLRLIKFHFTPNHHFGFEAAAWYWHFV 245
BLAST of CF417082 vs. ExPASy Swiss-Prot
Match: COX3_GORGO (Cytochrome c oxidase subunit 3 OS=Gorilla gorilla gorilla GN=MT-CO3 PE=3 SV=1) HSP 1 Score: 47.3654 bits (111), Expect = 1.240e-11 Identity = 39/156 (25.00%), Postives = 50/156 (32.05%), Query Frame = 1 Query: 121 DIQRERTFQGNHTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNYEIGLI*PPLNIKSFXXXXXXXXXXXXXXRSGISVT*AHSRICFNNSIQTNKRXXXXXXXXXXXFRFYNFMNI*LVHFASETQFTEERFFVTTGFHGIHVIIGTTF 588 D+ RE T+QG+HT P ++G PP I SG+S+T AH + NN Q + F F FFV TGFHG+HVIIG+TF Sbjct: 60 DVMRESTYQGHHTLPVQKGLRYGMILFITSEVFFFAGFFWAFYHSSLAPTPQLGAHWPPTGITPLNPLEVPLLNTSVLLASGVSITWAHHSLMENNRNQMIQALLITILLGLY-FTLLQASEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTF 214 HSP 2 Score: 41.2022 bits (95), Expect = 1.240e-11 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 2 Query: 587 FLTQVLMRLKIIHFSRKHHLGIEISI*YWHFV 682 FLT L+R + HF+ KHH G E + YWHFV Sbjct: 214 FLTICLIRQLMFHFTSKHHFGFEAAAWYWHFV 245 The following BLAST results are available for this feature:
BLAST of CF417082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417082 ID=CF417082; Name=CF417082; organism=Citrus sinensis; type=EST; length=682bpback to top |